Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.34■□□□□ 0.37
DUX3Q96PT4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
DUX3Q96PT4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DUX3Q96PT4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 AC008764.7-201ENST00000593779 1081 ntBASIC17.34■□□□□ 0.37
DUX3Q96PT4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.34■□□□□ 0.37
DUX3Q96PT4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.34■□□□□ 0.37
DUX3Q96PT4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DUX3Q96PT4 AL136967.2-201ENST00000623968 743 ntBASIC17.34■□□□□ 0.37
DUX3Q96PT4 AC241377.3-202ENST00000626088 1088 ntBASIC17.34■□□□□ 0.37
DUX3Q96PT4 AC241585.3-202ENST00000628937 1088 ntBASIC17.34■□□□□ 0.37
DUX3Q96PT4 AC245100.8-202ENST00000629247 1058 ntBASIC17.34■□□□□ 0.37
DUX3Q96PT4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
DUX3Q96PT4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX3Q96PT4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX3Q96PT4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.33■□□□□ 0.37
DUX3Q96PT4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX3Q96PT4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX3Q96PT4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DUX3Q96PT4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DUX3Q96PT4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DUX3Q96PT4 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.33■□□□□ 0.36
DUX3Q96PT4 AC105265.2-201ENST00000467189 838 ntBASIC17.33■□□□□ 0.36
DUX3Q96PT4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.33■□□□□ 0.36
DUX3Q96PT4 MIR3181-201ENST00000578512 73 ntBASIC17.33■□□□□ 0.36
DUX3Q96PT4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.33■□□□□ 0.36
DUX3Q96PT4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
DUX3Q96PT4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DUX3Q96PT4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DUX3Q96PT4 AL139125.2-201ENST00000623134 1869 ntBASIC17.33■□□□□ 0.36
DUX3Q96PT4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 AC004812.2-201ENST00000611079 2094 ntBASIC17.32■□□□□ 0.36
DUX3Q96PT4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 pRNA.6-201ENST00000610482 90 ntBASIC17.32■□□□□ 0.36
DUX3Q96PT4 pRNA.5-201ENST00000612139 90 ntBASIC17.32■□□□□ 0.36
DUX3Q96PT4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.32■□□□□ 0.36
DUX3Q96PT4 pRNA.11-201ENST00000618423 90 ntBASIC17.32■□□□□ 0.36
DUX3Q96PT4 pRNA.13-201ENST00000619112 90 ntBASIC17.32■□□□□ 0.36
DUX3Q96PT4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DUX3Q96PT4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 ABCB10P4-201ENST00000566803 2184 ntBASIC17.31■□□□□ 0.36
DUX3Q96PT4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 MIR939-201ENST00000401314 82 ntBASIC17.31■□□□□ 0.36
DUX3Q96PT4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DUX3Q96PT4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
DUX3Q96PT4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 AC011298.3-201ENST00000615796 283 ntBASIC17.3■□□□□ 0.36
DUX3Q96PT4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DUX3Q96PT4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms