Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 FAM210CP-201ENST00000445714 574 ntBASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 AC098590.1-201ENST00000468126 897 ntBASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.49■■□□□ 1.03
CNTNAP3BQ96NU0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 AL449106.1-201ENST00000608517 1980 ntBASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.48■■□□□ 1.03
CNTNAP3BQ96NU0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 pRNA.6-201ENST00000610482 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 pRNA.5-201ENST00000612139 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 pRNA.11-201ENST00000618423 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 pRNA.13-201ENST00000619112 90 ntBASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CNTNAP3BQ96NU0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNTNAP3BQ96NU0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 ECEL1P3-201ENST00000427961 737 ntBASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 AC004854.2-201ENST00000608450 1441 ntBASIC21.45■■□□□ 1.02
CNTNAP3BQ96NU0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 AC133041.1-202ENST00000642053 222 ntBASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNTNAP3BQ96NU0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNTNAP3BQ96NU0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CNTNAP3BQ96NU0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 GCSHP5-201ENST00000443090 522 ntBASIC21.41■■□□□ 1.02
CNTNAP3BQ96NU0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms