Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 AC080038.3-201ENST00000623346 1952 ntBASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 ZNRF2P2-203ENST00000454624 420 ntBASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 AC092296.2-201ENST00000589470 999 ntBASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 AC090877.2-201ENST00000558441 1738 ntBASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLPTM1LQ96KA5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPTM1LQ96KA5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLPTM1LQ96KA5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CLPTM1LQ96KA5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
CLPTM1LQ96KA5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 AC073130.3-201ENST00000624389 2278 ntBASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CLPTM1LQ96KA5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLPTM1LQ96KA5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLPTM1LQ96KA5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLPTM1LQ96KA5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.45■■□□□ 1.03
CLPTM1LQ96KA5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 KRT18P10-201ENST00000388836 1287 ntBASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLPTM1LQ96KA5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.44■■□□□ 1.02
CLPTM1LQ96KA5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLPTM1LQ96KA5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1LQ96KA5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLPTM1LQ96KA5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms