Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ATP5G2P3-201ENST00000429083 425 ntBASIC21.28■■□□□ 1
ITCHQ96J02 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ITCHQ96J02 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.28■■□□□ 1
ITCHQ96J02 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.28■■□□□ 1
ITCHQ96J02 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.28■■□□□ 1
ITCHQ96J02 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.27■■□□□ 1
ITCHQ96J02 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ITCHQ96J02 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.27■■□□□ 1
ITCHQ96J02 PVT1_1.1-201ENST00000615125 194 ntBASIC21.27■■□□□ 1
ITCHQ96J02 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ITCHQ96J02 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.27■■□□□ 1
ITCHQ96J02 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ITCHQ96J02 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITCHQ96J02 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ITCHQ96J02 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ITCHQ96J02 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ITCHQ96J02 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.26■□□□□ 0.99
ITCHQ96J02 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ITCHQ96J02 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITCHQ96J02 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITCHQ96J02 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
ITCHQ96J02 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ITCHQ96J02 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.25■□□□□ 0.99
ITCHQ96J02 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
ITCHQ96J02 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ITCHQ96J02 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
ITCHQ96J02 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.24■□□□□ 0.99
ITCHQ96J02 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITCHQ96J02 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITCHQ96J02 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITCHQ96J02 AC127496.7-201ENST00000625110 1798 ntBASIC21.24■□□□□ 0.99
ITCHQ96J02 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.24■□□□□ 0.99
ITCHQ96J02 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ITCHQ96J02 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.24■□□□□ 0.99
ITCHQ96J02 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ITCHQ96J02 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.23■□□□□ 0.99
ITCHQ96J02 LINC00565-201ENST00000562710 2331 ntBASIC21.23■□□□□ 0.99
ITCHQ96J02 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
ITCHQ96J02 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 AC010980.1-201ENST00000587192 1142 ntBASIC21.23■□□□□ 0.99
ITCHQ96J02 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.23■□□□□ 0.99
ITCHQ96J02 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ITCHQ96J02 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
ITCHQ96J02 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ITCHQ96J02 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.23■□□□□ 0.99
ITCHQ96J02 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ITCHQ96J02 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ITCHQ96J02 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.22■□□□□ 0.99
ITCHQ96J02 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.22■□□□□ 0.99
ITCHQ96J02 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ITCHQ96J02 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.22■□□□□ 0.99
ITCHQ96J02 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ITCHQ96J02 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITCHQ96J02 TSPY13P-201ENST00000338964 914 ntBASIC21.21■□□□□ 0.99
ITCHQ96J02 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITCHQ96J02 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITCHQ96J02 AL353803.4-201ENST00000565882 1934 ntBASIC21.21■□□□□ 0.99
ITCHQ96J02 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ITCHQ96J02 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ITCHQ96J02 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ITCHQ96J02 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.99
ITCHQ96J02 AC242852.2-201ENST00000615738 1807 ntBASIC21.2■□□□□ 0.98
ITCHQ96J02 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.2■□□□□ 0.98
ITCHQ96J02 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.2■□□□□ 0.98
ITCHQ96J02 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.2■□□□□ 0.98
ITCHQ96J02 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.2■□□□□ 0.98
ITCHQ96J02 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ITCHQ96J02 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms