Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
USP6NLQ92738 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
USP6NLQ92738 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
USP6NLQ92738 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
USP6NLQ92738 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP6NLQ92738 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
USP6NLQ92738 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.6■■□□□ 1.69
USP6NLQ92738 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
USP6NLQ92738 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.6■■□□□ 1.69
USP6NLQ92738 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.6■■□□□ 1.69
USP6NLQ92738 LINC02228-203ENST00000641970 1355 ntBASIC25.59■■□□□ 1.69
USP6NLQ92738 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
USP6NLQ92738 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
USP6NLQ92738 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.59■■□□□ 1.69
USP6NLQ92738 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
USP6NLQ92738 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.59■■□□□ 1.69
USP6NLQ92738 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
USP6NLQ92738 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.59■■□□□ 1.69
USP6NLQ92738 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.58■■□□□ 1.69
USP6NLQ92738 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.58■■□□□ 1.69
USP6NLQ92738 OR2I1P-207ENST00000453522 948 ntBASIC25.58■■□□□ 1.69
USP6NLQ92738 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.58■■□□□ 1.69
USP6NLQ92738 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.58■■□□□ 1.69
USP6NLQ92738 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
USP6NLQ92738 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
USP6NLQ92738 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
USP6NLQ92738 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
USP6NLQ92738 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
USP6NLQ92738 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
USP6NLQ92738 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
USP6NLQ92738 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
USP6NLQ92738 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.57■■□□□ 1.68
USP6NLQ92738 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
USP6NLQ92738 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.57■■□□□ 1.68
USP6NLQ92738 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
USP6NLQ92738 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
USP6NLQ92738 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
USP6NLQ92738 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
USP6NLQ92738 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
USP6NLQ92738 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.56■■□□□ 1.68
USP6NLQ92738 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.56■■□□□ 1.68
USP6NLQ92738 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.56■■□□□ 1.68
USP6NLQ92738 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
USP6NLQ92738 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
USP6NLQ92738 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
USP6NLQ92738 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
USP6NLQ92738 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
USP6NLQ92738 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
USP6NLQ92738 AC091060.1-201ENST00000623524 1766 ntBASIC25.54■■□□□ 1.68
USP6NLQ92738 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.54■■□□□ 1.68
USP6NLQ92738 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
USP6NLQ92738 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
USP6NLQ92738 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.54■■□□□ 1.68
USP6NLQ92738 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.54■■□□□ 1.68
USP6NLQ92738 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
USP6NLQ92738 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.54■■□□□ 1.68
USP6NLQ92738 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
USP6NLQ92738 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.54■■□□□ 1.68
USP6NLQ92738 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
USP6NLQ92738 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.54■■□□□ 1.68
USP6NLQ92738 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
USP6NLQ92738 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
USP6NLQ92738 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.53■■□□□ 1.68
USP6NLQ92738 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
USP6NLQ92738 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
USP6NLQ92738 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.53■■□□□ 1.68
USP6NLQ92738 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.53■■□□□ 1.68
USP6NLQ92738 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
USP6NLQ92738 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
USP6NLQ92738 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
USP6NLQ92738 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.53■■□□□ 1.68
USP6NLQ92738 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
USP6NLQ92738 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.52■■□□□ 1.68
USP6NLQ92738 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
USP6NLQ92738 AC145676.1-201ENST00000514988 2004 ntBASIC25.51■■□□□ 1.67
USP6NLQ92738 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.51■■□□□ 1.67
USP6NLQ92738 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.51■■□□□ 1.67
USP6NLQ92738 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.51■■□□□ 1.67
USP6NLQ92738 AP005435.1-201ENST00000529293 1178 ntBASIC25.51■■□□□ 1.67
USP6NLQ92738 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.51■■□□□ 1.67
USP6NLQ92738 KRT18P61-201ENST00000585825 1298 ntBASIC25.51■■□□□ 1.67
USP6NLQ92738 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
USP6NLQ92738 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
USP6NLQ92738 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.51■■□□□ 1.67
USP6NLQ92738 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
USP6NLQ92738 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.51■■□□□ 1.67
USP6NLQ92738 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
USP6NLQ92738 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms