Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
AP3S1Q92572 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.72■□□□□ 0.75
AP3S1Q92572 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
AP3S1Q92572 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.72■□□□□ 0.75
AP3S1Q92572 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.72■□□□□ 0.75
AP3S1Q92572 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.72■□□□□ 0.75
AP3S1Q92572 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
AP3S1Q92572 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.72■□□□□ 0.75
AP3S1Q92572 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
AP3S1Q92572 AC139530.1-201ENST00000575312 1977 ntBASIC19.72■□□□□ 0.75
AP3S1Q92572 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3S1Q92572 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3S1Q92572 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
AP3S1Q92572 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
AP3S1Q92572 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
AP3S1Q92572 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
AP3S1Q92572 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
AP3S1Q92572 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
AP3S1Q92572 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 FBXW4P1-201ENST00000426721 2239 ntBASIC19.7■□□□□ 0.74
AP3S1Q92572 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 DUX4L11-201ENST00000611504 1267 ntBASIC19.7■□□□□ 0.74
AP3S1Q92572 DUX4L12-201ENST00000614593 1267 ntBASIC19.7■□□□□ 0.74
AP3S1Q92572 DUX4L14-201ENST00000621227 1267 ntBASIC19.7■□□□□ 0.74
AP3S1Q92572 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
AP3S1Q92572 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S1Q92572 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.7■□□□□ 0.74
AP3S1Q92572 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3S1Q92572 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3S1Q92572 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.69■□□□□ 0.74
AP3S1Q92572 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AP3S1Q92572 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.69■□□□□ 0.74
AP3S1Q92572 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S1Q92572 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AP3S1Q92572 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
AP3S1Q92572 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3S1Q92572 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
AP3S1Q92572 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S1Q92572 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
AP3S1Q92572 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.67■□□□□ 0.74
AP3S1Q92572 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3S1Q92572 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
AP3S1Q92572 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.67■□□□□ 0.74
AP3S1Q92572 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3S1Q92572 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S1Q92572 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.66■□□□□ 0.74
AP3S1Q92572 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S1Q92572 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3S1Q92572 AL157400.5-201ENST00000507624 621 ntBASIC19.66■□□□□ 0.74
AP3S1Q92572 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S1Q92572 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S1Q92572 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S1Q92572 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms