Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TM9SF4Q92544 AC004812.2-201ENST00000611079 2094 ntBASIC21.06■□□□□ 0.96
TM9SF4Q92544 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF4Q92544 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF4Q92544 MIR939-201ENST00000401314 82 ntBASIC21.06■□□□□ 0.96
TM9SF4Q92544 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.06■□□□□ 0.96
TM9SF4Q92544 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.06■□□□□ 0.96
TM9SF4Q92544 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TM9SF4Q92544 AC131274.2-201ENST00000580697 1507 ntBASIC21.05■□□□□ 0.96
TM9SF4Q92544 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF4Q92544 AP001330.3-201ENST00000520123 633 ntBASIC21.05■□□□□ 0.96
TM9SF4Q92544 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.05■□□□□ 0.96
TM9SF4Q92544 DUSP8P5-201ENST00000422884 1815 ntBASIC21.05■□□□□ 0.96
TM9SF4Q92544 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF4Q92544 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF4Q92544 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF4Q92544 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF4Q92544 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF4Q92544 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF4Q92544 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.04■□□□□ 0.96
TM9SF4Q92544 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF4Q92544 AC079834.2-201ENST00000609776 1949 ntBASIC21.04■□□□□ 0.96
TM9SF4Q92544 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF4Q92544 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TM9SF4Q92544 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.03■□□□□ 0.96
TM9SF4Q92544 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.03■□□□□ 0.96
TM9SF4Q92544 AC027682.1-201ENST00000562846 899 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 MIR4767-201ENST00000582827 78 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 AC011298.3-201ENST00000615796 283 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 AC241377.3-202ENST00000626088 1088 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 AC241585.3-202ENST00000628937 1088 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 AC245100.8-202ENST00000629247 1058 ntBASIC21.03■□□□□ 0.96
TM9SF4Q92544 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF4Q92544 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF4Q92544 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF4Q92544 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF4Q92544 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TM9SF4Q92544 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF4Q92544 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.02■□□□□ 0.96
TM9SF4Q92544 AC092666.2-201ENST00000613287 246 ntBASIC21.02■□□□□ 0.96
TM9SF4Q92544 MIR6089-201ENST00000616698 64 ntBASIC21.02■□□□□ 0.96
TM9SF4Q92544 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF4Q92544 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF4Q92544 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.02■□□□□ 0.96
TM9SF4Q92544 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.02■□□□□ 0.96
TM9SF4Q92544 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM9SF4Q92544 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF4Q92544 RASA4CP-201ENST00000424092 1398 ntBASIC21.01■□□□□ 0.95
TM9SF4Q92544 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF4Q92544 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.01■□□□□ 0.95
TM9SF4Q92544 AC099791.2-201ENST00000605725 427 ntBASIC21.01■□□□□ 0.95
TM9SF4Q92544 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TM9SF4Q92544 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TM9SF4Q92544 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.01■□□□□ 0.95
TM9SF4Q92544 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF4Q92544 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF4Q92544 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF4Q92544 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF4Q92544 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF4Q92544 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 SERBP1P1-201ENST00000396021 1160 ntBASIC21■□□□□ 0.95
TM9SF4Q92544 AC026271.2-201ENST00000428091 497 ntBASIC21■□□□□ 0.95
TM9SF4Q92544 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 AC104564.3-201ENST00000582367 638 ntBASIC21■□□□□ 0.95
TM9SF4Q92544 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21■□□□□ 0.95
TM9SF4Q92544 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TM9SF4Q92544 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TM9SF4Q92544 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.99■□□□□ 0.95
TM9SF4Q92544 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF4Q92544 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.99■□□□□ 0.95
TM9SF4Q92544 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF4Q92544 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM9SF4Q92544 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TM9SF4Q92544 CA15P2-201ENST00000611168 834 ntBASIC20.98■□□□□ 0.95
TM9SF4Q92544 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF4Q92544 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
TM9SF4Q92544 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.97■□□□□ 0.95
TM9SF4Q92544 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
TM9SF4Q92544 AC009102.2-201ENST00000606772 1639 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms