Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1BQ8WW43 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.34■□□□□ 0.85
APH1BQ8WW43 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APH1BQ8WW43 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.33■□□□□ 0.85
APH1BQ8WW43 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APH1BQ8WW43 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.33■□□□□ 0.85
APH1BQ8WW43 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APH1BQ8WW43 AC080038.3-201ENST00000623346 1952 ntBASIC20.33■□□□□ 0.84
APH1BQ8WW43 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APH1BQ8WW43 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APH1BQ8WW43 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
APH1BQ8WW43 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
APH1BQ8WW43 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
APH1BQ8WW43 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APH1BQ8WW43 AL592295.1-201ENST00000400984 884 ntBASIC20.31■□□□□ 0.84
APH1BQ8WW43 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.31■□□□□ 0.84
APH1BQ8WW43 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APH1BQ8WW43 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APH1BQ8WW43 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APH1BQ8WW43 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
APH1BQ8WW43 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APH1BQ8WW43 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APH1BQ8WW43 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APH1BQ8WW43 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APH1BQ8WW43 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APH1BQ8WW43 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APH1BQ8WW43 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.29■□□□□ 0.84
APH1BQ8WW43 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.29■□□□□ 0.84
APH1BQ8WW43 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APH1BQ8WW43 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APH1BQ8WW43 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
APH1BQ8WW43 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
APH1BQ8WW43 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APH1BQ8WW43 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APH1BQ8WW43 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APH1BQ8WW43 AC009831.1-201ENST00000580420 1582 ntBASIC20.28■□□□□ 0.84
APH1BQ8WW43 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APH1BQ8WW43 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APH1BQ8WW43 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
APH1BQ8WW43 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
APH1BQ8WW43 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APH1BQ8WW43 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.27■□□□□ 0.83
APH1BQ8WW43 SLC25A24-204ENST00000569674 2357 ntBASIC20.27■□□□□ 0.83
APH1BQ8WW43 AC026310.3-201ENST00000625186 2373 ntBASIC20.27■□□□□ 0.83
APH1BQ8WW43 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
APH1BQ8WW43 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APH1BQ8WW43 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.26■□□□□ 0.83
APH1BQ8WW43 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
APH1BQ8WW43 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.26■□□□□ 0.83
APH1BQ8WW43 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
APH1BQ8WW43 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
APH1BQ8WW43 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
APH1BQ8WW43 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
APH1BQ8WW43 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
APH1BQ8WW43 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.25■□□□□ 0.83
APH1BQ8WW43 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
APH1BQ8WW43 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
APH1BQ8WW43 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.25■□□□□ 0.83
APH1BQ8WW43 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
APH1BQ8WW43 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
APH1BQ8WW43 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
APH1BQ8WW43 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
APH1BQ8WW43 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms