Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST4Q8NFU0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST4Q8NFU0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 AC242852.2-201ENST00000615738 1807 ntBASIC19.24■□□□□ 0.67
BEST4Q8NFU0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BEST4Q8NFU0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 AL161729.1-201ENST00000604104 1402 ntBASIC19.23■□□□□ 0.67
BEST4Q8NFU0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BEST4Q8NFU0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 AC090877.2-201ENST00000558441 1738 ntBASIC19.22■□□□□ 0.67
BEST4Q8NFU0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST4Q8NFU0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 MIR639-201ENST00000384974 98 ntBASIC19.21■□□□□ 0.67
BEST4Q8NFU0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST4Q8NFU0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST4Q8NFU0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 AC073130.3-201ENST00000624389 2278 ntBASIC19.19■□□□□ 0.66
BEST4Q8NFU0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST4Q8NFU0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms