Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VPS37AQ8NEZ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 AC079630.1-202ENST00000618127 1840 ntBASIC21.28■■□□□ 1
VPS37AQ8NEZ2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 AL033527.3-201ENST00000566366 1196 ntBASIC21.28■■□□□ 1
VPS37AQ8NEZ2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
VPS37AQ8NEZ2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VPS37AQ8NEZ2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
VPS37AQ8NEZ2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VPS37AQ8NEZ2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VPS37AQ8NEZ2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VPS37AQ8NEZ2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VPS37AQ8NEZ2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 AC103834.1-201ENST00000520383 144 ntBASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS37AQ8NEZ2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 KRT8P33-201ENST00000508125 1423 ntBASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 AC103724.3-201ENST00000564481 992 ntBASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 SNX5-217ENST00000606557 1087 ntBASIC21.21■□□□□ 0.99
VPS37AQ8NEZ2 AC137630.3-201ENST00000607245 391 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms