Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.33■■□□□ 1.01
SRFBP1Q8NEF9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRFBP1Q8NEF9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.33■■□□□ 1.01
SRFBP1Q8NEF9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SRFBP1Q8NEF9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.32■■□□□ 1
SRFBP1Q8NEF9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 LINC01529-204ENST00000636474 1715 ntBASIC21.32■■□□□ 1
SRFBP1Q8NEF9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRFBP1Q8NEF9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.31■■□□□ 1
SRFBP1Q8NEF9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFBP1Q8NEF9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 C17orf82-201ENST00000623772 1530 ntBASIC21.3■■□□□ 1
SRFBP1Q8NEF9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.3■■□□□ 1
SRFBP1Q8NEF9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFBP1Q8NEF9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 AL353803.4-201ENST00000565882 1934 ntBASIC21.28■■□□□ 1
SRFBP1Q8NEF9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRFBP1Q8NEF9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 DUX4L4-201ENST00000566884 1269 ntBASIC21.27■■□□□ 1
SRFBP1Q8NEF9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 AC241377.3-202ENST00000626088 1088 ntBASIC21.27■■□□□ 1
SRFBP1Q8NEF9 AC241585.3-202ENST00000628937 1088 ntBASIC21.27■■□□□ 1
SRFBP1Q8NEF9 AC245100.8-202ENST00000629247 1058 ntBASIC21.27■■□□□ 1
SRFBP1Q8NEF9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.27■■□□□ 1
SRFBP1Q8NEF9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.27■□□□□ 0.99
SRFBP1Q8NEF9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.26■□□□□ 0.99
SRFBP1Q8NEF9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms