Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PNLDC1Q8NA58 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
PNLDC1Q8NA58 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.46■□□□□ 0.71
PNLDC1Q8NA58 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PNLDC1Q8NA58 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PNLDC1Q8NA58 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 AC131274.2-201ENST00000580697 1507 ntBASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PNLDC1Q8NA58 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 AC120024.1-201ENST00000562672 995 ntBASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PNLDC1Q8NA58 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
PNLDC1Q8NA58 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PNLDC1Q8NA58 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 Z92544.1-202ENST00000571933 1220 ntBASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PNLDC1Q8NA58 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 BX664725.1-201ENST00000438252 379 ntBASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PNLDC1Q8NA58 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PNLDC1Q8NA58 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PNLDC1Q8NA58 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PNLDC1Q8NA58 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PNLDC1Q8NA58 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PNLDC1Q8NA58 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PNLDC1Q8NA58 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PNLDC1Q8NA58 KRT125P-201ENST00000546827 989 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms