Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DTX3Q8N9I9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DTX3Q8N9I9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 U85056.1-201ENST00000616429 682 ntBASIC19.65■□□□□ 0.74
DTX3Q8N9I9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DTX3Q8N9I9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DTX3Q8N9I9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 TSPY13P-201ENST00000338964 914 ntBASIC19.64■□□□□ 0.73
DTX3Q8N9I9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DTX3Q8N9I9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 RP9P-202ENST00000450133 1212 ntBASIC19.63■□□□□ 0.73
DTX3Q8N9I9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
DTX3Q8N9I9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DTX3Q8N9I9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 AC133552.2-201ENST00000619106 1032 ntBASIC19.61■□□□□ 0.73
DTX3Q8N9I9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DTX3Q8N9I9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DTX3Q8N9I9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DTX3Q8N9I9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DTX3Q8N9I9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DTX3Q8N9I9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.59■□□□□ 0.73
DTX3Q8N9I9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms