Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 AC011298.3-201ENST00000615796 283 ntBASIC23.42■■□□□ 1.34
SCML4Q8N228 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.42■■□□□ 1.34
SCML4Q8N228 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SCML4Q8N228 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SCML4Q8N228 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.41■■□□□ 1.34
SCML4Q8N228 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 MIR3181-201ENST00000578512 73 ntBASIC23.41■■□□□ 1.34
SCML4Q8N228 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.41■■□□□ 1.34
SCML4Q8N228 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SCML4Q8N228 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.41■■□□□ 1.34
SCML4Q8N228 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
SCML4Q8N228 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SCML4Q8N228 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.4■■□□□ 1.34
SCML4Q8N228 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.4■■□□□ 1.34
SCML4Q8N228 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
SCML4Q8N228 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SCML4Q8N228 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.4■■□□□ 1.34
SCML4Q8N228 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.4■■□□□ 1.34
SCML4Q8N228 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.4■■□□□ 1.34
SCML4Q8N228 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SCML4Q8N228 AC133561.4-201ENST00000566112 224 ntBASIC23.4■■□□□ 1.34
SCML4Q8N228 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.4■■□□□ 1.34
SCML4Q8N228 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.4■■□□□ 1.34
SCML4Q8N228 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SCML4Q8N228 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.39■■□□□ 1.34
SCML4Q8N228 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCML4Q8N228 AC106739.1-201ENST00000617035 715 ntBASIC23.39■■□□□ 1.33
SCML4Q8N228 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.39■■□□□ 1.33
SCML4Q8N228 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.39■■□□□ 1.33
SCML4Q8N228 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.33
SCML4Q8N228 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.39■■□□□ 1.33
SCML4Q8N228 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCML4Q8N228 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCML4Q8N228 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SCML4Q8N228 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
SCML4Q8N228 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.38■■□□□ 1.33
SCML4Q8N228 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCML4Q8N228 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCML4Q8N228 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.38■■□□□ 1.33
SCML4Q8N228 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.38■■□□□ 1.33
SCML4Q8N228 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.38■■□□□ 1.33
SCML4Q8N228 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.38■■□□□ 1.33
SCML4Q8N228 AL136162.1-201ENST00000607711 1078 ntBASIC23.38■■□□□ 1.33
SCML4Q8N228 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.38■■□□□ 1.33
SCML4Q8N228 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SCML4Q8N228 AL353803.4-201ENST00000565882 1934 ntBASIC23.37■■□□□ 1.33
SCML4Q8N228 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCML4Q8N228 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.37■■□□□ 1.33
SCML4Q8N228 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCML4Q8N228 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCML4Q8N228 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCML4Q8N228 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCML4Q8N228 pRNA.6-201ENST00000610482 90 ntBASIC23.37■■□□□ 1.33
SCML4Q8N228 pRNA.5-201ENST00000612139 90 ntBASIC23.37■■□□□ 1.33
SCML4Q8N228 pRNA.11-201ENST00000618423 90 ntBASIC23.37■■□□□ 1.33
SCML4Q8N228 pRNA.13-201ENST00000619112 90 ntBASIC23.37■■□□□ 1.33
SCML4Q8N228 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.37■■□□□ 1.33
SCML4Q8N228 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.37■■□□□ 1.33
SCML4Q8N228 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SCML4Q8N228 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 AC135279.3-201ENST00000610945 1311 ntBASIC23.36■■□□□ 1.33
SCML4Q8N228 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.36■■□□□ 1.33
SCML4Q8N228 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.36■■□□□ 1.33
SCML4Q8N228 AC136469.2-201ENST00000623944 1028 ntBASIC23.36■■□□□ 1.33
SCML4Q8N228 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCML4Q8N228 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
SCML4Q8N228 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.36■■□□□ 1.33
SCML4Q8N228 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.35■■□□□ 1.33
SCML4Q8N228 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 AC024257.2-201ENST00000549699 147 ntBASIC23.35■■□□□ 1.33
SCML4Q8N228 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.35■■□□□ 1.33
SCML4Q8N228 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SCML4Q8N228 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCML4Q8N228 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCML4Q8N228 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCML4Q8N228 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.34■■□□□ 1.33
SCML4Q8N228 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCML4Q8N228 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.34■■□□□ 1.33
SCML4Q8N228 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.34■■□□□ 1.33
SCML4Q8N228 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SCML4Q8N228 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCML4Q8N228 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SCML4Q8N228 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SCML4Q8N228 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
SCML4Q8N228 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms