Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC01561Q8N1V8 AC004448.1-201ENST00000458332 883 ntBASIC15.02■□□□□ -0
LINC01561Q8N1V8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.02■□□□□ -0
LINC01561Q8N1V8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC01561Q8N1V8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01561Q8N1V8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01561Q8N1V8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01561Q8N1V8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01561Q8N1V8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01561Q8N1V8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01561Q8N1V8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LINC01561Q8N1V8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 KRT18P24-201ENST00000344739 1156 ntBASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 AC139795.1-202ENST00000500444 432 ntBASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01561Q8N1V8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 RARRES2P2-201ENST00000394842 485 ntBASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 AC120024.1-201ENST00000562672 995 ntBASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 AC074183.2-201ENST00000623112 922 ntBASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC01561Q8N1V8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 AC092053.2-201ENST00000640557 1818 ntBASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 AF131216.4-201ENST00000638924 1588 ntBASIC14.97□□□□□ -0.01
LINC01561Q8N1V8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms