Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.97■■□□□ 1.59
DHX40Q8IX18 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.97■■□□□ 1.59
DHX40Q8IX18 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 AC139530.1-201ENST00000575312 1977 ntBASIC24.96■■□□□ 1.59
DHX40Q8IX18 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DHX40Q8IX18 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DHX40Q8IX18 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DHX40Q8IX18 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
DHX40Q8IX18 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
DHX40Q8IX18 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
DHX40Q8IX18 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
DHX40Q8IX18 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
DHX40Q8IX18 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
DHX40Q8IX18 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DHX40Q8IX18 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.95■■□□□ 1.58
DHX40Q8IX18 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.95■■□□□ 1.58
DHX40Q8IX18 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
DHX40Q8IX18 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DHX40Q8IX18 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.95■■□□□ 1.58
DHX40Q8IX18 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
DHX40Q8IX18 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DHX40Q8IX18 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
DHX40Q8IX18 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 DUX4L18-201ENST00000553347 1267 ntBASIC24.94■■□□□ 1.58
DHX40Q8IX18 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.94■■□□□ 1.58
DHX40Q8IX18 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
DHX40Q8IX18 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DHX40Q8IX18 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DHX40Q8IX18 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
DHX40Q8IX18 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
DHX40Q8IX18 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.93■■□□□ 1.58
DHX40Q8IX18 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.93■■□□□ 1.58
DHX40Q8IX18 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
DHX40Q8IX18 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.93■■□□□ 1.58
DHX40Q8IX18 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
DHX40Q8IX18 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.93■■□□□ 1.58
DHX40Q8IX18 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
DHX40Q8IX18 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.92■■□□□ 1.58
DHX40Q8IX18 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
DHX40Q8IX18 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.92■■□□□ 1.58
DHX40Q8IX18 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
DHX40Q8IX18 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.91■■□□□ 1.58
DHX40Q8IX18 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 AL353803.4-201ENST00000565882 1934 ntBASIC24.91■■□□□ 1.58
DHX40Q8IX18 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
DHX40Q8IX18 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
DHX40Q8IX18 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.91■■□□□ 1.58
DHX40Q8IX18 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
DHX40Q8IX18 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DHX40Q8IX18 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
DHX40Q8IX18 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
DHX40Q8IX18 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.9■■□□□ 1.58
DHX40Q8IX18 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DHX40Q8IX18 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
DHX40Q8IX18 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DHX40Q8IX18 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.9■■□□□ 1.58
DHX40Q8IX18 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
DHX40Q8IX18 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
DHX40Q8IX18 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 AF131216.4-201ENST00000638924 1588 ntBASIC24.89■■□□□ 1.58
DHX40Q8IX18 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.89■■□□□ 1.58
DHX40Q8IX18 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
DHX40Q8IX18 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.89■■□□□ 1.58
DHX40Q8IX18 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 368.1 ms