Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 AC126177.7-201ENST00000547904 679 ntBASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CROCCP3Q8IVE0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CROCCP3Q8IVE0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CROCCP3Q8IVE0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CROCCP3Q8IVE0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CROCCP3Q8IVE0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L13-201ENST00000554103 1267 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L15-201ENST00000611059 1267 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L23-201ENST00000615195 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L24-201ENST00000617576 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 LINC01971-201ENST00000617888 1048 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L22-201ENST00000618238 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L20-201ENST00000619712 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L21-201ENST00000622058 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L10-201ENST00000622460 1267 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DUX4L25-201ENST00000624915 1269 ntBASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CROCCP3Q8IVE0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.2■□□□□ 0.82
CROCCP3Q8IVE0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms