Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
TRIM50Q86XT4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.07■■□□□ 1.6
TRIM50Q86XT4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.06■■□□□ 1.6
TRIM50Q86XT4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TRIM50Q86XT4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 AC004812.2-201ENST00000611079 2094 ntBASIC25.05■■□□□ 1.6
TRIM50Q86XT4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TRIM50Q86XT4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.04■■□□□ 1.6
TRIM50Q86XT4 AL139125.2-201ENST00000623134 1869 ntBASIC25.04■■□□□ 1.6
TRIM50Q86XT4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 IRS3P-201ENST00000223076 1006 ntBASIC25.03■■□□□ 1.6
TRIM50Q86XT4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.03■■□□□ 1.6
TRIM50Q86XT4 LINC00543-201ENST00000567234 1845 ntBASIC25.02■■□□□ 1.6
TRIM50Q86XT4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 AC133637.1-201ENST00000624115 1537 ntBASIC25.02■■□□□ 1.6
TRIM50Q86XT4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 AC087623.3-201ENST00000607047 1098 ntBASIC25.02■■□□□ 1.6
TRIM50Q86XT4 MIR5787-201ENST00000611784 55 ntBASIC25.02■■□□□ 1.6
TRIM50Q86XT4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TRIM50Q86XT4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM50Q86XT4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.01■■□□□ 1.59
TRIM50Q86XT4 AC126544.1-201ENST00000580842 1059 ntBASIC25.01■■□□□ 1.59
TRIM50Q86XT4 MIR6821-201ENST00000617625 74 ntBASIC25.01■■□□□ 1.59
TRIM50Q86XT4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.01■■□□□ 1.59
TRIM50Q86XT4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM50Q86XT4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRIM50Q86XT4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25■■□□□ 1.59
TRIM50Q86XT4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25■■□□□ 1.59
TRIM50Q86XT4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25■■□□□ 1.59
TRIM50Q86XT4 AC097381.1-201ENST00000429019 1296 ntBASIC25■■□□□ 1.59
TRIM50Q86XT4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM50Q86XT4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25■■□□□ 1.59
TRIM50Q86XT4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25■■□□□ 1.59
TRIM50Q86XT4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM50Q86XT4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TRIM50Q86XT4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25■■□□□ 1.59
TRIM50Q86XT4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25■■□□□ 1.59
TRIM50Q86XT4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
TRIM50Q86XT4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM50Q86XT4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25■■□□□ 1.59
TRIM50Q86XT4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
TRIM50Q86XT4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM50Q86XT4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
TRIM50Q86XT4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TRIM50Q86XT4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.99■■□□□ 1.59
TRIM50Q86XT4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.99■■□□□ 1.59
TRIM50Q86XT4 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.99■■□□□ 1.59
TRIM50Q86XT4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 AC010525.1-201ENST00000585559 441 ntBASIC24.98■■□□□ 1.59
TRIM50Q86XT4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 AL499627.2-201ENST00000606283 725 ntBASIC24.98■■□□□ 1.59
TRIM50Q86XT4 AC092666.2-201ENST00000613287 246 ntBASIC24.98■■□□□ 1.59
TRIM50Q86XT4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
TRIM50Q86XT4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 TSPY26P-201ENST00000476365 1326 ntBASIC24.97■■□□□ 1.59
TRIM50Q86XT4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms