Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CROCCP5-201ENST00000436658 830 ntBASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 IGHV3-19-201ENST00000521488 291 ntBASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 MIR6084-201ENST00000622012 110 ntBASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 AC080038.1-201ENST00000611274 1154 ntBASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.99□□□□□ -0.17
VPS13BQ7Z7G8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 KRT18P6-201ENST00000555540 1265 ntBASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VPS13BQ7Z7G8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 AC126544.1-201ENST00000580842 1059 ntBASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
VPS13BQ7Z7G8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VPS13BQ7Z7G8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 AC245100.8-202ENST00000629247 1058 ntBASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.96□□□□□ -0.18
VPS13BQ7Z7G8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13BQ7Z7G8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.95□□□□□ -0.18
VPS13BQ7Z7G8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13BQ7Z7G8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS13BQ7Z7G8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS13BQ7Z7G8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.94□□□□□ -0.18
VPS13BQ7Z7G8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms