Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00575Q6W349 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00575Q6W349 AL157400.5-201ENST00000507624 621 ntBASIC14.19□□□□□ -0.14
LINC00575Q6W349 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 SMPD5-203ENST00000639008 1464 ntBASIC14.18□□□□□ -0.14
LINC00575Q6W349 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 FBXW4P1-201ENST00000426721 2239 ntBASIC14.18□□□□□ -0.14
LINC00575Q6W349 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00575Q6W349 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00575Q6W349 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00575Q6W349 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00575Q6W349 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00575Q6W349 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00575Q6W349 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LINC00575Q6W349 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.16□□□□□ -0.14
LINC00575Q6W349 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00575Q6W349 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LINC00575Q6W349 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00575Q6W349 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00575Q6W349 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC14.15□□□□□ -0.14
LINC00575Q6W349 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LINC00575Q6W349 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00575Q6W349 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00575Q6W349 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.14□□□□□ -0.15
LINC00575Q6W349 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms