Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C11orf88Q6PI97 AC139795.1-202ENST00000500444 432 ntBASIC19.33■□□□□ 0.68
C11orf88Q6PI97 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C11orf88Q6PI97 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 C1orf229-201ENST00000623686 2258 ntBASIC19.32■□□□□ 0.68
C11orf88Q6PI97 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C11orf88Q6PI97 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 GUSBP5-202ENST00000510805 1989 ntBASIC19.31■□□□□ 0.68
C11orf88Q6PI97 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
C11orf88Q6PI97 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.3■□□□□ 0.68
C11orf88Q6PI97 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
C11orf88Q6PI97 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.29■□□□□ 0.68
C11orf88Q6PI97 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 AC007375.3-201ENST00000600936 2314 ntBASIC19.28■□□□□ 0.68
C11orf88Q6PI97 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
C11orf88Q6PI97 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.27■□□□□ 0.68
C11orf88Q6PI97 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
C11orf88Q6PI97 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C11orf88Q6PI97 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
C11orf88Q6PI97 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
C11orf88Q6PI97 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.27■□□□□ 0.67
C11orf88Q6PI97 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf88Q6PI97 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf88Q6PI97 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf88Q6PI97 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf88Q6PI97 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
C11orf88Q6PI97 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms