Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88Q6PEY1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88Q6PEY1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TMEM88Q6PEY1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TMEM88Q6PEY1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88Q6PEY1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88Q6PEY1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88Q6PEY1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM88Q6PEY1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88Q6PEY1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 ANOS2P-203ENST00000472227 1816 ntBASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM88Q6PEY1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88Q6PEY1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 AC110285.7-201ENST00000624417 1536 ntBASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88Q6PEY1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88Q6PEY1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms