Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 AC079630.1-202ENST00000618127 1840 ntBASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 AC011298.3-201ENST00000615796 283 ntBASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39AQ5SRH9 AC093323.1-202ENST00000635031 2045 ntBASIC27.33■■□□□ 1.96
TTC39AQ5SRH9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC39AQ5SRH9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TTC39AQ5SRH9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC39AQ5SRH9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
TTC39AQ5SRH9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC27.32■■□□□ 1.96
TTC39AQ5SRH9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TTC39AQ5SRH9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 LINC01529-204ENST00000636474 1715 ntBASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 DUX4L4-201ENST00000566884 1269 ntBASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 AL031432.3-201ENST00000607698 485 ntBASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TTC39AQ5SRH9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 EDA-201ENST00000338901 1233 ntBASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39AQ5SRH9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 AL355001.2-201ENST00000620617 1191 ntBASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 AC136469.2-201ENST00000623944 1028 ntBASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TTC39AQ5SRH9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TTC39AQ5SRH9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.27■■□□□ 1.96
TTC39AQ5SRH9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TTC39AQ5SRH9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.27■■□□□ 1.96
TTC39AQ5SRH9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.27■■□□□ 1.96
TTC39AQ5SRH9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 AC142381.2-201ENST00000566120 298 ntBASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39AQ5SRH9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 SUDS3P1-201ENST00000505831 966 ntBASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39AQ5SRH9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.24■■□□□ 1.95
TTC39AQ5SRH9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms