Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDCD4Q53EL6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDCD4Q53EL6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.49■■□□□ 1.03
PDCD4Q53EL6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 AC004448.1-201ENST00000458332 883 ntBASIC21.48■■□□□ 1.03
PDCD4Q53EL6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 DUX4L18-201ENST00000553347 1267 ntBASIC21.48■■□□□ 1.03
PDCD4Q53EL6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDCD4Q53EL6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 SLC25A24-204ENST00000569674 2357 ntBASIC21.47■■□□□ 1.03
PDCD4Q53EL6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 MIR4281-201ENST00000580852 62 ntBASIC21.47■■□□□ 1.03
PDCD4Q53EL6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDCD4Q53EL6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 KRT18P24-201ENST00000344739 1156 ntBASIC21.46■■□□□ 1.03
PDCD4Q53EL6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDCD4Q53EL6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 AC137767.1-201ENST00000602918 1920 ntBASIC21.45■■□□□ 1.02
PDCD4Q53EL6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
PDCD4Q53EL6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDCD4Q53EL6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 THA1P-201ENST00000590384 1145 ntBASIC21.43■■□□□ 1.02
PDCD4Q53EL6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 AL353803.4-201ENST00000565882 1934 ntBASIC21.43■■□□□ 1.02
PDCD4Q53EL6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDCD4Q53EL6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.42■■□□□ 1.02
PDCD4Q53EL6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PDCD4Q53EL6 AL121603.2-201ENST00000557373 2117 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms