Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 KCC4YCL024W 3114 nt4.48□□□□□ -1.69
RUP1Q12242 snR57snR57 88 nt4.48□□□□□ -1.69
RUP1Q12242 YDL027CYDL027C 1263 nt4.48□□□□□ -1.69
RUP1Q12242 YER133W-AYER133W-A 342 nt4.48□□□□□ -1.69
RUP1Q12242 ERV14YGL054C 417 nt4.48□□□□□ -1.69
RUP1Q12242 APS1YLR170C 471 nt4.48□□□□□ -1.69
RUP1Q12242 YMR010WYMR010W 1218 nt4.48□□□□□ -1.69
RUP1Q12242 GRE1YPL223C 507 nt4.48□□□□□ -1.69
RUP1Q12242 CKS1YBR135W 453 nt4.48□□□□□ -1.69
RUP1Q12242 TRM44YPL030W 1704 nt4.48□□□□□ -1.69
RUP1Q12242 PDR5YOR153W 4536 nt4.47□□□□□ -1.69
RUP1Q12242 SWC3YAL011W 1878 nt4.47□□□□□ -1.69
RUP1Q12242 FRE1YLR214W 2061 nt4.47□□□□□ -1.69
RUP1Q12242 PCL9YDL179W 915 nt4.47□□□□□ -1.69
RUP1Q12242 CNL1YDR357C 369 nt4.47□□□□□ -1.69
RUP1Q12242 LSM6YDR378C 261 nt4.47□□□□□ -1.69
RUP1Q12242 CAB1YDR531W 1104 nt4.47□□□□□ -1.69
RUP1Q12242 RNA15YGL044C 891 nt4.47□□□□□ -1.69
RUP1Q12242 YGR273CYGR273C 525 nt4.47□□□□□ -1.69
RUP1Q12242 YIL152WYIL152W 708 nt4.47□□□□□ -1.69
RUP1Q12242 YNL134CYNL134C 1131 nt4.47□□□□□ -1.69
RUP1Q12242 YIF1YNL263C 945 nt4.47□□□□□ -1.69
RUP1Q12242 AIF1YNR074C 1137 nt4.47□□□□□ -1.69
RUP1Q12242 YPL191CYPL191C 1083 nt4.47□□□□□ -1.69
RUP1Q12242 CTR1YPR124W 1221 nt4.47□□□□□ -1.69
RUP1Q12242 PEX30YLR324W 1572 nt4.47□□□□□ -1.69
RUP1Q12242 YCR023CYCR023C 1836 nt4.46□□□□□ -1.69
RUP1Q12242 TIF4632YGL049C 2745 nt4.46□□□□□ -1.69
RUP1Q12242 SEN1YLR430W 6696 nt4.46□□□□□ -1.7
RUP1Q12242 PRM1YNL279W 1986 nt4.46□□□□□ -1.7
RUP1Q12242 MIF2YKL089W 1650 nt4.46□□□□□ -1.7
RUP1Q12242 PFA5YDR459C 1125 nt4.46□□□□□ -1.7
RUP1Q12242 MOB2YFL034C-B 864 nt4.46□□□□□ -1.7
RUP1Q12242 ISA1YLL027W 753 nt4.46□□□□□ -1.7
RUP1Q12242 TDA5YLR426W 981 nt4.46□□□□□ -1.7
RUP1Q12242 TOM7YNL070W 183 nt4.46□□□□□ -1.7
RUP1Q12242 MGR2YPL098C 342 nt4.46□□□□□ -1.7
RUP1Q12242 IMD2YHR216W 1572 nt4.45□□□□□ -1.7
RUP1Q12242 SWI3YJL176C 2478 nt4.45□□□□□ -1.7
RUP1Q12242 CDC15YAR019C 2925 nt4.45□□□□□ -1.7
RUP1Q12242 ARG82YDR173C 1068 nt4.45□□□□□ -1.7
RUP1Q12242 TIM21YGR033C 720 nt4.45□□□□□ -1.7
RUP1Q12242 ANT1YPR128C 987 nt4.45□□□□□ -1.7
RUP1Q12242 RIA1YNL163C 3333 nt4.45□□□□□ -1.7
RUP1Q12242 RPG1YBR079C 2895 nt4.45□□□□□ -1.7
RUP1Q12242 GGA1YDR358W 1674 nt4.45□□□□□ -1.7
RUP1Q12242 GAS2YLR343W 1668 nt4.45□□□□□ -1.7
RUP1Q12242 TMN2YDR107C 2019 nt4.45□□□□□ -1.7
RUP1Q12242 GAS5YOL030W 1455 nt4.44□□□□□ -1.7
RUP1Q12242 YOL153CYOL153C 1746 nt4.44□□□□□ -1.7
RUP1Q12242 PEP5YMR231W 3090 nt4.44□□□□□ -1.7
RUP1Q12242 YCR075W-AYCR075W-A 228 nt4.44□□□□□ -1.7
RUP1Q12242 YDR056CYDR056C 618 nt4.44□□□□□ -1.7
RUP1Q12242 SNA2YDR525W-A 240 nt4.44□□□□□ -1.7
RUP1Q12242 LSO1YJR005C-A 282 nt4.44□□□□□ -1.7
RUP1Q12242 YMR105W-AYMR105W-A 195 nt4.44□□□□□ -1.7
RUP1Q12242 SPC24YMR117C 642 nt4.44□□□□□ -1.7
RUP1Q12242 YIM2YMR151W 438 nt4.44□□□□□ -1.7
RUP1Q12242 CUS2YNL286W 858 nt4.44□□□□□ -1.7
RUP1Q12242 YPR169W-AYPR169W-A 219 nt4.44□□□□□ -1.7
RUP1Q12242 YPR170W-BYPR170W-B 258 nt4.44□□□□□ -1.7
RUP1Q12242 YBR139WYBR139W 1527 nt4.44□□□□□ -1.7
RUP1Q12242 EGT2YNL327W 3126 nt4.44□□□□□ -1.7
RUP1Q12242 ULS1YOR191W 4860 nt4.44□□□□□ -1.7
RUP1Q12242 YDR444WYDR444W 2064 nt4.44□□□□□ -1.7
RUP1Q12242 ATM1YMR301C 2073 nt4.44□□□□□ -1.7
RUP1Q12242 STP4YDL048C 1473 nt4.43□□□□□ -1.7
RUP1Q12242 SPR28YDR218C 1272 nt4.43□□□□□ -1.7
RUP1Q12242 YEL053W-AYEL053W-A 348 nt4.43□□□□□ -1.7
RUP1Q12242 YGR016WYGR016W 573 nt4.43□□□□□ -1.7
RUP1Q12242 CIA2YHR122W 696 nt4.43□□□□□ -1.7
RUP1Q12242 HPM1YIL110W 1134 nt4.43□□□□□ -1.7
RUP1Q12242 YPL025CYPL025C 558 nt4.43□□□□□ -1.7
RUP1Q12242 PRM2YIL037C 1971 nt4.43□□□□□ -1.7
RUP1Q12242 FAS2YPL231W 5664 nt4.43□□□□□ -1.7
RUP1Q12242 MSC2YDR205W 2175 nt4.43□□□□□ -1.7
RUP1Q12242 ABF1YKL112W 2196 nt4.43□□□□□ -1.7
RUP1Q12242 DOS2YDR068W 933 nt4.42□□□□□ -1.7
RUP1Q12242 RKM2YDR198C 1440 nt4.42□□□□□ -1.7
RUP1Q12242 YDR249CYDR249C 1122 nt4.42□□□□□ -1.7
RUP1Q12242 BCP1YDR361C 852 nt4.42□□□□□ -1.7
RUP1Q12242 CAF16YFL028C 870 nt4.42□□□□□ -1.7
RUP1Q12242 YIL047C-AYIL047C-A 369 nt4.42□□□□□ -1.7
RUP1Q12242 YKR047WYKR047W 306 nt4.42□□□□□ -1.7
RUP1Q12242 YOL050CYOL050C 321 nt4.42□□□□□ -1.7
RUP1Q12242 PDX3YBR035C 687 nt4.42□□□□□ -1.7
RUP1Q12242 THS1YIL078W 2205 nt4.42□□□□□ -1.7
RUP1Q12242 RGP1YDR137W 1992 nt4.42□□□□□ -1.7
RUP1Q12242 FAA3YIL009W 2085 nt4.41□□□□□ -1.7
RUP1Q12242 COS7YDL248W 1152 nt4.41□□□□□ -1.7
RUP1Q12242 ACT1YFL039C 1128 nt4.41□□□□□ -1.7
RUP1Q12242 ERG26YGL001C 1050 nt4.41□□□□□ -1.7
RUP1Q12242 BUD13YGL174W 801 nt4.41□□□□□ -1.7
RUP1Q12242 COS5YJR161C 1152 nt4.41□□□□□ -1.7
RUP1Q12242 NAT3YPR131C 588 nt4.41□□□□□ -1.7
RUP1Q12242 HUL4YJR036C 2679 nt4.41□□□□□ -1.7
RUP1Q12242 LAS21YJL062W 2493 nt4.4□□□□□ -1.7
RUP1Q12242 HIR2YOR038C 2628 nt4.4□□□□□ -1.7
RUP1Q12242 TYW3YGL050W 822 nt4.4□□□□□ -1.71
RUP1Q12242 DAM1YGR113W 1032 nt4.4□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms