Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
COL16A1Q07092 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL16A1Q07092 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL16A1Q07092 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.9■■■□□ 2.54
COL16A1Q07092 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.9■■■□□ 2.54
COL16A1Q07092 AC069152.1-201ENST00000438030 544 ntBASIC30.9■■■□□ 2.54
COL16A1Q07092 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC30.9■■■□□ 2.54
COL16A1Q07092 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC30.9■■■□□ 2.54
COL16A1Q07092 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL16A1Q07092 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.9■■■□□ 2.54
COL16A1Q07092 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL16A1Q07092 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL16A1Q07092 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
COL16A1Q07092 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
COL16A1Q07092 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL16A1Q07092 TSPY6P-201ENST00000448518 926 ntBASIC30.88■■■□□ 2.53
COL16A1Q07092 AC011767.1-201ENST00000617410 1153 ntBASIC30.88■■■□□ 2.53
COL16A1Q07092 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL16A1Q07092 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
COL16A1Q07092 AC139426.1-201ENST00000568218 2529 ntBASIC30.88■■■□□ 2.53
COL16A1Q07092 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL16A1Q07092 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.87■■■□□ 2.53
COL16A1Q07092 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
COL16A1Q07092 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL16A1Q07092 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL16A1Q07092 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC30.87■■■□□ 2.53
COL16A1Q07092 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC30.87■■■□□ 2.53
COL16A1Q07092 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.87■■■□□ 2.53
COL16A1Q07092 ERN1-208ENST00000606895 2068 ntBASIC30.86■■■□□ 2.53
COL16A1Q07092 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL16A1Q07092 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.86■■■□□ 2.53
COL16A1Q07092 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL16A1Q07092 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC30.86■■■□□ 2.53
COL16A1Q07092 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.85■■■□□ 2.53
COL16A1Q07092 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL16A1Q07092 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC30.85■■■□□ 2.53
COL16A1Q07092 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
COL16A1Q07092 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL16A1Q07092 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.84■■■□□ 2.53
COL16A1Q07092 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC30.84■■■□□ 2.53
COL16A1Q07092 AL138781.1-201ENST00000566567 1274 ntBASIC30.84■■■□□ 2.53
COL16A1Q07092 MFSD11-216ENST00000590393 1141 ntBASIC30.84■■■□□ 2.53
COL16A1Q07092 AL121832.2-201ENST00000610979 668 ntBASIC30.84■■■□□ 2.53
COL16A1Q07092 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
COL16A1Q07092 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.84■■■□□ 2.53
COL16A1Q07092 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL16A1Q07092 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.84■■■□□ 2.53
COL16A1Q07092 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
COL16A1Q07092 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.83■■■□□ 2.53
COL16A1Q07092 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL16A1Q07092 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL16A1Q07092 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL16A1Q07092 METTL15-202ENST00000403099 795 ntTSL 5 BASIC30.83■■■□□ 2.53
COL16A1Q07092 KRT19P1-201ENST00000405746 1186 ntBASIC30.83■■■□□ 2.53
COL16A1Q07092 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC30.83■■■□□ 2.53
COL16A1Q07092 MIR6089-201ENST00000616698 64 ntBASIC30.83■■■□□ 2.53
COL16A1Q07092 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
COL16A1Q07092 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL16A1Q07092 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.82■■■□□ 2.52
COL16A1Q07092 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL16A1Q07092 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
COL16A1Q07092 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL16A1Q07092 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
COL16A1Q07092 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
COL16A1Q07092 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
COL16A1Q07092 TFG-210ENST00000620299 1289 ntTSL 5 BASIC30.81■■■□□ 2.52
COL16A1Q07092 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
COL16A1Q07092 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
COL16A1Q07092 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
COL16A1Q07092 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 KRT18P11-201ENST00000435214 1283 ntBASIC30.8■■■□□ 2.52
COL16A1Q07092 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 DUX4L4-201ENST00000566884 1269 ntBASIC30.8■■■□□ 2.52
COL16A1Q07092 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.8■■■□□ 2.52
COL16A1Q07092 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL16A1Q07092 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
COL16A1Q07092 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.8■■■□□ 2.52
COL16A1Q07092 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
COL16A1Q07092 AC098934.4-201ENST00000564127 592 ntBASIC30.8■■■□□ 2.52
COL16A1Q07092 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
COL16A1Q07092 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
COL16A1Q07092 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
COL16A1Q07092 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.79■■■□□ 2.52
COL16A1Q07092 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC30.79■■■□□ 2.52
COL16A1Q07092 AC087239.1-201ENST00000622671 572 ntBASIC30.79■■■□□ 2.52
COL16A1Q07092 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.79■■■□□ 2.52
COL16A1Q07092 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL16A1Q07092 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL16A1Q07092 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
COL16A1Q07092 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.78■■■□□ 2.52
COL16A1Q07092 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms