Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPL38P63173 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPL38P63173 AC103724.3-201ENST00000564481 992 ntBASIC21.54■■□□□ 1.04
RPL38P63173 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPL38P63173 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.54■■□□□ 1.04
RPL38P63173 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RPL38P63173 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPL38P63173 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPL38P63173 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPL38P63173 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPL38P63173 SNX5-217ENST00000606557 1087 ntBASIC21.53■■□□□ 1.04
RPL38P63173 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.52■■□□□ 1.04
RPL38P63173 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.52■■□□□ 1.04
RPL38P63173 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPL38P63173 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPL38P63173 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.52■■□□□ 1.04
RPL38P63173 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.52■■□□□ 1.04
RPL38P63173 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPL38P63173 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RPL38P63173 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPL38P63173 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.52■■□□□ 1.04
RPL38P63173 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
RPL38P63173 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RPL38P63173 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RPL38P63173 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.51■■□□□ 1.03
RPL38P63173 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RPL38P63173 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPL38P63173 AL353803.4-201ENST00000565882 1934 ntBASIC21.51■■□□□ 1.03
RPL38P63173 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
RPL38P63173 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.5■■□□□ 1.03
RPL38P63173 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.5■■□□□ 1.03
RPL38P63173 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.5■■□□□ 1.03
RPL38P63173 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPL38P63173 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RPL38P63173 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPL38P63173 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.49■■□□□ 1.03
RPL38P63173 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.49■■□□□ 1.03
RPL38P63173 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPL38P63173 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RPL38P63173 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPL38P63173 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RPL38P63173 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.48■■□□□ 1.03
RPL38P63173 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.48■■□□□ 1.03
RPL38P63173 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPL38P63173 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RPL38P63173 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.48■■□□□ 1.03
RPL38P63173 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPL38P63173 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.48■■□□□ 1.03
RPL38P63173 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPL38P63173 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPL38P63173 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RPL38P63173 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RPL38P63173 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.48■■□□□ 1.03
RPL38P63173 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.48■■□□□ 1.03
RPL38P63173 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.48■■□□□ 1.03
RPL38P63173 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RPL38P63173 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
RPL38P63173 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RPL38P63173 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
RPL38P63173 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.47■■□□□ 1.03
RPL38P63173 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.47■■□□□ 1.03
RPL38P63173 AL031848.2-201ENST00000607670 837 ntBASIC21.47■■□□□ 1.03
RPL38P63173 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.47■■□□□ 1.03
RPL38P63173 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.47■■□□□ 1.03
RPL38P63173 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RPL38P63173 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPL38P63173 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.46■■□□□ 1.03
RPL38P63173 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.46■■□□□ 1.03
RPL38P63173 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.46■■□□□ 1.03
RPL38P63173 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPL38P63173 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RPL38P63173 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPL38P63173 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RPL38P63173 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RPL38P63173 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RPL38P63173 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.45■■□□□ 1.02
RPL38P63173 AC137630.3-201ENST00000607245 391 ntBASIC21.45■■□□□ 1.02
RPL38P63173 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RPL38P63173 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms