Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.45■□□□□ 0.86
CDC42P60953 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42P60953 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.44■□□□□ 0.86
CDC42P60953 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 AC018755.3-202ENST00000596210 929 ntBASIC20.44■□□□□ 0.86
CDC42P60953 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.44■□□□□ 0.86
CDC42P60953 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDC42P60953 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42P60953 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.43■□□□□ 0.86
CDC42P60953 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.43■□□□□ 0.86
CDC42P60953 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDC42P60953 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDC42P60953 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42P60953 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CDC42P60953 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.42■□□□□ 0.86
CDC42P60953 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDC42P60953 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
CDC42P60953 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42P60953 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDC42P60953 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDC42P60953 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42P60953 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CDC42P60953 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.41■□□□□ 0.86
CDC42P60953 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDC42P60953 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CDC42P60953 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42P60953 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42P60953 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42P60953 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDC42P60953 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42P60953 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDC42P60953 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.4■□□□□ 0.86
CDC42P60953 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CDC42P60953 AC131274.2-201ENST00000580697 1507 ntBASIC20.4■□□□□ 0.86
CDC42P60953 AC087393.1-201ENST00000582896 145 ntBASIC20.4■□□□□ 0.86
CDC42P60953 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CDC42P60953 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CDC42P60953 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
CDC42P60953 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDC42P60953 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42P60953 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42P60953 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42P60953 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42P60953 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.39■□□□□ 0.85
CDC42P60953 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42P60953 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.39■□□□□ 0.85
CDC42P60953 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CDC42P60953 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDC42P60953 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.38■□□□□ 0.85
CDC42P60953 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.38■□□□□ 0.85
CDC42P60953 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.38■□□□□ 0.85
CDC42P60953 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42P60953 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.38■□□□□ 0.85
CDC42P60953 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42P60953 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms