Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
SMIM11AP58511 AC120024.1-201ENST00000562672 995 ntBASIC20.61■□□□□ 0.89
SMIM11AP58511 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMIM11AP58511 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM11AP58511 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.6■□□□□ 0.89
SMIM11AP58511 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SMIM11AP58511 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMIM11AP58511 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.6■□□□□ 0.89
SMIM11AP58511 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM11AP58511 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
SMIM11AP58511 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMIM11AP58511 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM11AP58511 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM11AP58511 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SMIM11AP58511 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM11AP58511 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 KRT18P24-201ENST00000344739 1156 ntBASIC20.59■□□□□ 0.89
SMIM11AP58511 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 AC004448.1-201ENST00000458332 883 ntBASIC20.59■□□□□ 0.89
SMIM11AP58511 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.59■□□□□ 0.89
SMIM11AP58511 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.59■□□□□ 0.89
SMIM11AP58511 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM11AP58511 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM11AP58511 AC137767.1-201ENST00000602918 1920 ntBASIC20.59■□□□□ 0.89
SMIM11AP58511 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SMIM11AP58511 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM11AP58511 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.58■□□□□ 0.89
SMIM11AP58511 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM11AP58511 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM11AP58511 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.58■□□□□ 0.89
SMIM11AP58511 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SMIM11AP58511 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.58■□□□□ 0.88
SMIM11AP58511 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM11AP58511 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM11AP58511 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM11AP58511 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SMIM11AP58511 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.58■□□□□ 0.88
SMIM11AP58511 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SMIM11AP58511 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.57■□□□□ 0.88
SMIM11AP58511 THA1P-201ENST00000590384 1145 ntBASIC20.57■□□□□ 0.88
SMIM11AP58511 AC074183.2-201ENST00000623112 922 ntBASIC20.57■□□□□ 0.88
SMIM11AP58511 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SMIM11AP58511 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.57■□□□□ 0.88
SMIM11AP58511 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM11AP58511 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.56■□□□□ 0.88
SMIM11AP58511 AF131216.4-201ENST00000638924 1588 ntBASIC20.56■□□□□ 0.88
SMIM11AP58511 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SMIM11AP58511 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM11AP58511 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.56■□□□□ 0.88
SMIM11AP58511 HSD17B1P1-201ENST00000590052 955 ntBASIC20.56■□□□□ 0.88
SMIM11AP58511 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SMIM11AP58511 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM11AP58511 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.55■□□□□ 0.88
SMIM11AP58511 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.55■□□□□ 0.88
SMIM11AP58511 DUX4L18-201ENST00000553347 1267 ntBASIC20.55■□□□□ 0.88
SMIM11AP58511 MIR4281-201ENST00000580852 62 ntBASIC20.55■□□□□ 0.88
SMIM11AP58511 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.55■□□□□ 0.88
SMIM11AP58511 BHLHE23-202ENST00000612929 1109 ntBASIC20.55■□□□□ 0.88
SMIM11AP58511 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM11AP58511 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
SMIM11AP58511 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SMIM11AP58511 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM11AP58511 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms