Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.1■□□□□ 0.97
RAB38P57729 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.09■□□□□ 0.97
RAB38P57729 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
RAB38P57729 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 AC009086.3-201ENST00000623486 1008 ntBASIC21.09■□□□□ 0.97
RAB38P57729 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RAB38P57729 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAB38P57729 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAB38P57729 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB38P57729 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
RAB38P57729 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.08■□□□□ 0.97
RAB38P57729 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB38P57729 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAB38P57729 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RAB38P57729 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.08■□□□□ 0.97
RAB38P57729 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RAB38P57729 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB38P57729 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAB38P57729 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB38P57729 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB38P57729 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.07■□□□□ 0.96
RAB38P57729 AL353803.4-201ENST00000565882 1934 ntBASIC21.07■□□□□ 0.96
RAB38P57729 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB38P57729 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB38P57729 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB38P57729 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAB38P57729 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
RAB38P57729 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.06■□□□□ 0.96
RAB38P57729 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RAB38P57729 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 AC006455.2-201ENST00000429931 906 ntBASIC21.06■□□□□ 0.96
RAB38P57729 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAB38P57729 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RAB38P57729 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB38P57729 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.05■□□□□ 0.96
RAB38P57729 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RAB38P57729 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.05■□□□□ 0.96
RAB38P57729 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.05■□□□□ 0.96
RAB38P57729 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.05■□□□□ 0.96
RAB38P57729 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.05■□□□□ 0.96
RAB38P57729 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAB38P57729 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RAB38P57729 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RAB38P57729 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAB38P57729 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB38P57729 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB38P57729 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.04■□□□□ 0.96
RAB38P57729 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RAB38P57729 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 DUX4L19-201ENST00000557448 1267 ntBASIC21.04■□□□□ 0.96
RAB38P57729 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB38P57729 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.04■□□□□ 0.96
RAB38P57729 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.04■□□□□ 0.96
RAB38P57729 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAB38P57729 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB38P57729 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB38P57729 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB38P57729 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB38P57729 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB38P57729 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.03■□□□□ 0.96
RAB38P57729 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB38P57729 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB38P57729 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB38P57729 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB38P57729 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RAB38P57729 DUSP8P3-201ENST00000399571 1760 ntBASIC21.02■□□□□ 0.96
RAB38P57729 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB38P57729 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RAB38P57729 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms