Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.56■□□□□ 0.88
PER3P56645 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PER3P56645 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PER3P56645 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.55■□□□□ 0.88
PER3P56645 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PER3P56645 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PER3P56645 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PER3P56645 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PER3P56645 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PER3P56645 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PER3P56645 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PER3P56645 AC011298.3-201ENST00000615796 283 ntBASIC20.54■□□□□ 0.88
PER3P56645 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PER3P56645 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
PER3P56645 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PER3P56645 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PER3P56645 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.53■□□□□ 0.88
PER3P56645 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.53■□□□□ 0.88
PER3P56645 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.53■□□□□ 0.88
PER3P56645 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.53■□□□□ 0.88
PER3P56645 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PER3P56645 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PER3P56645 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PER3P56645 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PER3P56645 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PER3P56645 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.52■□□□□ 0.88
PER3P56645 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PER3P56645 AC008764.7-201ENST00000593779 1081 ntBASIC20.52■□□□□ 0.88
PER3P56645 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.52■□□□□ 0.88
PER3P56645 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PER3P56645 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PER3P56645 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PER3P56645 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.51■□□□□ 0.87
PER3P56645 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PER3P56645 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.51■□□□□ 0.87
PER3P56645 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.51■□□□□ 0.87
PER3P56645 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.51■□□□□ 0.87
PER3P56645 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.51■□□□□ 0.87
PER3P56645 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.51■□□□□ 0.87
PER3P56645 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PER3P56645 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PER3P56645 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.5■□□□□ 0.87
PER3P56645 SERBP1P1-201ENST00000396021 1160 ntBASIC20.5■□□□□ 0.87
PER3P56645 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.5■□□□□ 0.87
PER3P56645 MIR6089-201ENST00000616698 64 ntBASIC20.5■□□□□ 0.87
PER3P56645 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PER3P56645 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
PER3P56645 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PER3P56645 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.49■□□□□ 0.87
PER3P56645 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.49■□□□□ 0.87
PER3P56645 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PER3P56645 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.49■□□□□ 0.87
PER3P56645 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.49■□□□□ 0.87
PER3P56645 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.49■□□□□ 0.87
PER3P56645 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.48■□□□□ 0.87
PER3P56645 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PER3P56645 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PER3P56645 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.48■□□□□ 0.87
PER3P56645 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.48■□□□□ 0.87
PER3P56645 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PER3P56645 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PER3P56645 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PER3P56645 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 AL022069.1-201ENST00000568025 1636 ntBASIC20.47■□□□□ 0.87
PER3P56645 AC099791.1-201ENST00000416440 715 ntBASIC20.47■□□□□ 0.87
PER3P56645 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.47■□□□□ 0.87
PER3P56645 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.47■□□□□ 0.87
PER3P56645 AL137784.2-201ENST00000607332 1000 ntBASIC20.47■□□□□ 0.87
PER3P56645 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.47■□□□□ 0.87
PER3P56645 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PER3P56645 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.46■□□□□ 0.87
PER3P56645 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PER3P56645 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.46■□□□□ 0.87
PER3P56645 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.46■□□□□ 0.87
PER3P56645 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PER3P56645 AC034268.1-201ENST00000441047 882 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms