Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.09■□□□□ 0.97
NR1H2P55055 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NR1H2P55055 AL035685.1-201ENST00000636663 812 ntBASIC21.09■□□□□ 0.97
NR1H2P55055 HLA-L-211ENST00000482052 1765 ntBASIC21.09■□□□□ 0.97
NR1H2P55055 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NR1H2P55055 AC092068.2-201ENST00000590491 1708 ntBASIC21.09■□□□□ 0.97
NR1H2P55055 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NR1H2P55055 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
NR1H2P55055 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NR1H2P55055 AC242852.2-201ENST00000615738 1807 ntBASIC21.08■□□□□ 0.97
NR1H2P55055 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NR1H2P55055 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR1H2P55055 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NR1H2P55055 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR1H2P55055 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NR1H2P55055 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.08■□□□□ 0.97
NR1H2P55055 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
NR1H2P55055 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NR1H2P55055 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
NR1H2P55055 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR1H2P55055 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NR1H2P55055 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NR1H2P55055 KRT8P33-201ENST00000508125 1423 ntBASIC21.07■□□□□ 0.96
NR1H2P55055 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.07■□□□□ 0.96
NR1H2P55055 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NR1H2P55055 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR1H2P55055 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.07■□□□□ 0.96
NR1H2P55055 AL451085.2-201ENST00000605085 799 ntBASIC21.07■□□□□ 0.96
NR1H2P55055 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.07■□□□□ 0.96
NR1H2P55055 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NR1H2P55055 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NR1H2P55055 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NR1H2P55055 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NR1H2P55055 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
NR1H2P55055 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NR1H2P55055 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
NR1H2P55055 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.06■□□□□ 0.96
NR1H2P55055 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.06■□□□□ 0.96
NR1H2P55055 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.06■□□□□ 0.96
NR1H2P55055 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NR1H2P55055 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NR1H2P55055 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.06■□□□□ 0.96
NR1H2P55055 KRT18P10-201ENST00000388836 1287 ntBASIC21.05■□□□□ 0.96
NR1H2P55055 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NR1H2P55055 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NR1H2P55055 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NR1H2P55055 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NR1H2P55055 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.04■□□□□ 0.96
NR1H2P55055 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NR1H2P55055 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NR1H2P55055 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.04■□□□□ 0.96
NR1H2P55055 MIR4508-201ENST00000584178 70 ntBASIC21.04■□□□□ 0.96
NR1H2P55055 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.04■□□□□ 0.96
NR1H2P55055 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.04■□□□□ 0.96
NR1H2P55055 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NR1H2P55055 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NR1H2P55055 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NR1H2P55055 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NR1H2P55055 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NR1H2P55055 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.03■□□□□ 0.96
NR1H2P55055 AC019171.1-201ENST00000601251 1056 ntBASIC21.03■□□□□ 0.96
NR1H2P55055 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.03■□□□□ 0.96
NR1H2P55055 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NR1H2P55055 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.02■□□□□ 0.96
NR1H2P55055 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR1H2P55055 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.02■□□□□ 0.96
NR1H2P55055 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR1H2P55055 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.02■□□□□ 0.96
NR1H2P55055 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NR1H2P55055 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.02■□□□□ 0.96
NR1H2P55055 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
NR1H2P55055 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.02■□□□□ 0.96
NR1H2P55055 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.02■□□□□ 0.96
NR1H2P55055 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NR1H2P55055 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NR1H2P55055 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NR1H2P55055 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NR1H2P55055 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
NR1H2P55055 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NR1H2P55055 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NR1H2P55055 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NR1H2P55055 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.01■□□□□ 0.95
NR1H2P55055 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
NR1H2P55055 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 AC073130.3-201ENST00000624389 2278 ntBASIC21.01■□□□□ 0.95
NR1H2P55055 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NR1H2P55055 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
NR1H2P55055 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21■□□□□ 0.95
NR1H2P55055 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H2P55055 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
NR1H2P55055 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21■□□□□ 0.95
NR1H2P55055 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms