Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YCL075WYCL075W 441 nt5.34□□□□□ -1.55
SUB1P54000 DFM1YDR411C 1026 nt5.34□□□□□ -1.55
SUB1P54000 YGR066CYGR066C 879 nt5.34□□□□□ -1.55
SUB1P54000 PAN6YIL145C 930 nt5.34□□□□□ -1.55
SUB1P54000 DCS1YLR270W 1053 nt5.34□□□□□ -1.55
SUB1P54000 SOL1YNR034W 966 nt5.34□□□□□ -1.55
SUB1P54000 YOL050CYOL050C 321 nt5.34□□□□□ -1.55
SUB1P54000 CLF1YLR117C 2064 nt5.34□□□□□ -1.55
SUB1P54000 POL1YNL102W 4407 nt5.33□□□□□ -1.56
SUB1P54000 YDL034WYDL034W 345 nt5.33□□□□□ -1.56
SUB1P54000 NUS1YDL193W 1128 nt5.33□□□□□ -1.56
SUB1P54000 YDR154CYDR154C 351 nt5.33□□□□□ -1.56
SUB1P54000 YHL049CYHL049C 816 nt5.33□□□□□ -1.56
SUB1P54000 DBR1YKL149C 1218 nt5.33□□□□□ -1.56
SUB1P54000 CDA2YLR308W 939 nt5.33□□□□□ -1.56
SUB1P54000 HTA2YBL003C 399 nt5.33□□□□□ -1.56
SUB1P54000 YLR428CYLR428C 345 nt5.33□□□□□ -1.56
SUB1P54000 YBR255C-AYBR255C-A 363 nt5.33□□□□□ -1.56
SUB1P54000 MDM38YOL027C 1722 nt5.33□□□□□ -1.56
SUB1P54000 CTR86YCR054C 1692 nt5.33□□□□□ -1.56
SUB1P54000 YDL119CYDL119C 924 nt5.32□□□□□ -1.56
SUB1P54000 BGL2YGR282C 942 nt5.32□□□□□ -1.56
SUB1P54000 GCD7YLR291C 1146 nt5.32□□□□□ -1.56
SUB1P54000 RPL21BYPL079W 483 nt5.32□□□□□ -1.56
SUB1P54000 UGA2YBR006W 1494 nt5.32□□□□□ -1.56
SUB1P54000 ROK1YGL171W 1695 nt5.31□□□□□ -1.56
SUB1P54000 COX26YDR119W-A 201 nt5.31□□□□□ -1.56
SUB1P54000 SEH1YGL100W 1050 nt5.31□□□□□ -1.56
SUB1P54000 YPL136WYPL136W 369 nt5.31□□□□□ -1.56
SUB1P54000 ENV7YPL236C 1095 nt5.31□□□□□ -1.56
SUB1P54000 NUP133YKR082W 3474 nt5.31□□□□□ -1.56
SUB1P54000 SSH4YKL124W 1740 nt5.31□□□□□ -1.56
SUB1P54000 BUD5YCR038C 1929 nt5.31□□□□□ -1.56
SUB1P54000 TDA7YNL176C 1911 nt5.31□□□□□ -1.56
SUB1P54000 PRP28YDR243C 1767 nt5.3□□□□□ -1.56
SUB1P54000 ERD1YDR414C 1089 nt5.3□□□□□ -1.56
SUB1P54000 YLF2YHL014C 1218 nt5.3□□□□□ -1.56
SUB1P54000 SYN8YAL014C 768 nt5.3□□□□□ -1.56
SUB1P54000 AAD10YJR155W 867 nt5.3□□□□□ -1.56
SUB1P54000 YKL177WYKL177W 339 nt5.3□□□□□ -1.56
SUB1P54000 YBR056W-AYBR056W-A 201 nt5.3□□□□□ -1.56
SUB1P54000 BCK2YER167W 2556 nt5.3□□□□□ -1.56
SUB1P54000 HXT14YNL318C 1623 nt5.3□□□□□ -1.56
SUB1P54000 ALO1YML086C 1581 nt5.29□□□□□ -1.56
SUB1P54000 RSC6YCR052W 1452 nt5.29□□□□□ -1.56
SUB1P54000 YDL144CYDL144C 1071 nt5.29□□□□□ -1.56
SUB1P54000 YGL188CYGL188C 174 nt5.29□□□□□ -1.56
SUB1P54000 PRP45YAL032C 1140 nt5.29□□□□□ -1.56
SUB1P54000 SFK1YKL051W 1062 nt5.29□□□□□ -1.56
SUB1P54000 ZRT2YLR130C 1269 nt5.29□□□□□ -1.56
SUB1P54000 VPS28YPL065W 729 nt5.29□□□□□ -1.56
SUB1P54000 CBC2YPL178W 627 nt5.29□□□□□ -1.56
SUB1P54000 CNS1YBR155W 1158 nt5.29□□□□□ -1.56
SUB1P54000 RIM21YNL294C 1602 nt5.29□□□□□ -1.56
SUB1P54000 PGM2YMR105C 1710 nt5.28□□□□□ -1.56
SUB1P54000 HMG1YML075C 3165 nt5.28□□□□□ -1.56
SUB1P54000 NBP2YDR162C 711 nt5.28□□□□□ -1.56
SUB1P54000 HSX1tR(CCU)J 72 nt5.28□□□□□ -1.56
SUB1P54000 YHR212W-AYHR212W-A 204 nt5.28□□□□□ -1.56
SUB1P54000 YAR061WYAR061W 204 nt5.28□□□□□ -1.56
SUB1P54000 snR19snR19 568 nt5.28□□□□□ -1.56
SUB1P54000 PUF3YLL013C 2640 nt5.28□□□□□ -1.56
SUB1P54000 GLT1YDL171C 6438 nt5.28□□□□□ -1.56
SUB1P54000 SPB4YFL002C 1821 nt5.27□□□□□ -1.57
SUB1P54000 TUB3YML124C 1338 nt5.27□□□□□ -1.57
SUB1P54000 RPL28YGL103W 450 nt5.27□□□□□ -1.57
SUB1P54000 COS9YKL219W 1224 nt5.27□□□□□ -1.57
SUB1P54000 HPR1YDR138W 2259 nt5.27□□□□□ -1.57
SUB1P54000 SRO9YCL037C 1305 nt5.26□□□□□ -1.57
SUB1P54000 PRR1YKL116C 1557 nt5.26□□□□□ -1.57
SUB1P54000 YCL068CYCL068C 783 nt5.26□□□□□ -1.57
SUB1P54000 OCA4YCR095C 1089 nt5.26□□□□□ -1.57
SUB1P54000 NOP6YDL213C 678 nt5.26□□□□□ -1.57
SUB1P54000 CLC1YGR167W 702 nt5.26□□□□□ -1.57
SUB1P54000 YLL059CYLL059C 507 nt5.26□□□□□ -1.57
SUB1P54000 PAM18YLR008C 507 nt5.26□□□□□ -1.57
SUB1P54000 YLR049CYLR049C 1287 nt5.26□□□□□ -1.57
SUB1P54000 PRX1YBL064C 786 nt5.26□□□□□ -1.57
SUB1P54000 AIM39YOL053W 1188 nt5.26□□□□□ -1.57
SUB1P54000 YOR1YGR281W 4434 nt5.26□□□□□ -1.57
SUB1P54000 PAF1YBR279W 1338 nt5.25□□□□□ -1.57
SUB1P54000 DIN7YDR263C 1293 nt5.25□□□□□ -1.57
SUB1P54000 FMC1YIL098C 468 nt5.25□□□□□ -1.57
SUB1P54000 TAF4YMR005W 1167 nt5.25□□□□□ -1.57
SUB1P54000 snR17bsnR17b 332 nt5.25□□□□□ -1.57
SUB1P54000 FRM2YCL026C-A 582 nt5.25□□□□□ -1.57
SUB1P54000 CAF4YKR036C 1932 nt5.25□□□□□ -1.57
SUB1P54000 AUA1YFL010W-A 285 nt5.24□□□□□ -1.57
SUB1P54000 SCW4YGR279C 1161 nt5.24□□□□□ -1.57
SUB1P54000 RPL8AYHL033C 771 nt5.24□□□□□ -1.57
SUB1P54000 COS8YHL048W 1146 nt5.24□□□□□ -1.57
SUB1P54000 BNA1YJR025C 534 nt5.24□□□□□ -1.57
SUB1P54000 SNO4YMR322C 714 nt5.24□□□□□ -1.57
SUB1P54000 CUZ1YNL155W 825 nt5.24□□□□□ -1.57
SUB1P54000 HSP33YOR391C 714 nt5.24□□□□□ -1.57
SUB1P54000 HSP32YPL280W 714 nt5.24□□□□□ -1.57
SUB1P54000 QCR2YPR191W 1107 nt5.24□□□□□ -1.57
SUB1P54000 YBR230W-AYBR230W-A 201 nt5.24□□□□□ -1.57
SUB1P54000 DCC1YCL016C 1143 nt5.24□□□□□ -1.57
SUB1P54000 RVB1YDR190C 1392 nt5.24□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms