Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YLR346CYLR346C 306 nt4.38□□□□□ -1.71
YNL040WP53960 YML031C-AYML031C-A 336 nt4.38□□□□□ -1.71
YNL040WP53960 GTR1YML121W 933 nt4.38□□□□□ -1.71
YNL040WP53960 HEM15YOR176W 1182 nt4.38□□□□□ -1.71
YNL040WP53960 SRB6YBR253W 366 nt4.38□□□□□ -1.71
YNL040WP53960 FOX2YKR009C 2703 nt4.38□□□□□ -1.71
YNL040WP53960 MCM4YPR019W 2802 nt4.38□□□□□ -1.71
YNL040WP53960 SSH1YBR283C 1473 nt4.37□□□□□ -1.71
YNL040WP53960 THS1YIL078W 2205 nt4.37□□□□□ -1.71
YNL040WP53960 ENT5YDR153C 1236 nt4.37□□□□□ -1.71
YNL040WP53960 TOM20YGR082W 552 nt4.37□□□□□ -1.71
YNL040WP53960 YHR193C-AYHR193C-A 375 nt4.37□□□□□ -1.71
YNL040WP53960 CSR1YLR380W 1227 nt4.37□□□□□ -1.71
YNL040WP53960 YOR292CYOR292C 930 nt4.37□□□□□ -1.71
YNL040WP53960 LAP2YNL045W 2016 nt4.37□□□□□ -1.71
YNL040WP53960 FZO1YBR179C 2568 nt4.37□□□□□ -1.71
YNL040WP53960 VPS73YGL104C 1461 nt4.37□□□□□ -1.71
YNL040WP53960 LAS1YKR063C 1509 nt4.36□□□□□ -1.71
YNL040WP53960 YPS7YDR349C 1791 nt4.36□□□□□ -1.71
YNL040WP53960 DAM1YGR113W 1032 nt4.36□□□□□ -1.71
YNL040WP53960 RDN5-1RDN5-1 121 nt4.36□□□□□ -1.71
YNL040WP53960 RDN5-6RDN5-6 121 nt4.36□□□□□ -1.71
YNL040WP53960 VPS68YOL129W 555 nt4.36□□□□□ -1.71
YNL040WP53960 DIT2YDR402C 1470 nt4.36□□□□□ -1.71
YNL040WP53960 MET3YJR010W 1536 nt4.36□□□□□ -1.71
YNL040WP53960 RPC53YDL150W 1269 nt4.35□□□□□ -1.71
YNL040WP53960 EFB1YAL003W 621 nt4.35□□□□□ -1.71
YNL040WP53960 SUI1YNL244C 327 nt4.35□□□□□ -1.71
YNL040WP53960 YDC1YPL087W 954 nt4.35□□□□□ -1.71
YNL040WP53960 SEN1YLR430W 6696 nt4.35□□□□□ -1.71
YNL040WP53960 BUD8YLR353W 1812 nt4.35□□□□□ -1.71
YNL040WP53960 TPA1YER049W 1935 nt4.34□□□□□ -1.71
YNL040WP53960 ADY3YDL239C 2373 nt4.34□□□□□ -1.71
YNL040WP53960 RPL24AYGL031C 468 nt4.34□□□□□ -1.71
YNL040WP53960 TYS1YGR185C 1185 nt4.34□□□□□ -1.71
YNL040WP53960 PML1YLR016C 615 nt4.34□□□□□ -1.71
YNL040WP53960 YBL010CYBL010C 843 nt4.34□□□□□ -1.71
YNL040WP53960 GAL11YOL051W 3246 nt4.34□□□□□ -1.72
YNL040WP53960 SAP155YFR040W 3009 nt4.33□□□□□ -1.72
YNL040WP53960 STB3YDR169C 1542 nt4.33□□□□□ -1.72
YNL040WP53960 PCL8YPL219W 1479 nt4.33□□□□□ -1.72
YNL040WP53960 TRM11YOL124C 1302 nt4.33□□□□□ -1.72
YNL040WP53960 API2YDR525W 330 nt4.33□□□□□ -1.72
YNL040WP53960 YGR122WYGR122W 1209 nt4.33□□□□□ -1.72
YNL040WP53960 YGR291CYGR291C 222 nt4.33□□□□□ -1.72
YNL040WP53960 AST1YBL069W 1290 nt4.33□□□□□ -1.72
YNL040WP53960 YBR298C-AYBR298C-A 222 nt4.33□□□□□ -1.72
YNL040WP53960 LYS2YBR115C 4179 nt4.33□□□□□ -1.72
YNL040WP53960 NOC2YOR206W 2133 nt4.33□□□□□ -1.72
YNL040WP53960 VMA1YDL185W 3216 nt4.32□□□□□ -1.72
YNL040WP53960 RPN5YDL147W 1338 nt4.32□□□□□ -1.72
YNL040WP53960 PTC1YDL006W 846 nt4.32□□□□□ -1.72
YNL040WP53960 HEK2YBL032W 1146 nt4.32□□□□□ -1.72
YNL040WP53960 VPS69YPR087W 321 nt4.32□□□□□ -1.72
YNL040WP53960 VID28YIL017C 2766 nt4.32□□□□□ -1.72
YNL040WP53960 YPK9YOR291W 4419 nt4.31□□□□□ -1.72
YNL040WP53960 MST1YKL194C 1389 nt4.31□□□□□ -1.72
YNL040WP53960 BCP1YDR361C 852 nt4.31□□□□□ -1.72
YNL040WP53960 YLR157W-DYLR157W-D 213 nt4.31□□□□□ -1.72
YNL040WP53960 PWR1PWR1 941 nt4.31□□□□□ -1.72
YNL040WP53960 PHO84YML123C 1764 nt4.31□□□□□ -1.72
YNL040WP53960 ABF1YKL112W 2196 nt4.31□□□□□ -1.72
YNL040WP53960 FRE1YLR214W 2061 nt4.31□□□□□ -1.72
YNL040WP53960 VHS3YOR054C 2025 nt4.31□□□□□ -1.72
YNL040WP53960 RRN11YML043C 1524 nt4.31□□□□□ -1.72
YNL040WP53960 SAC1YKL212W 1872 nt4.3□□□□□ -1.72
YNL040WP53960 THI7YLR237W 1797 nt4.3□□□□□ -1.72
YNL040WP53960 RAD57YDR004W 1383 nt4.3□□□□□ -1.72
YNL040WP53960 TRS85YDR108W 2097 nt4.3□□□□□ -1.72
YNL040WP53960 BIO2YGR286C 1128 nt4.3□□□□□ -1.72
YNL040WP53960 SPC34YKR037C 888 nt4.3□□□□□ -1.72
YNL040WP53960 YLR122CYLR122C 378 nt4.3□□□□□ -1.72
YNL040WP53960 RMI1YPL024W 726 nt4.3□□□□□ -1.72
YNL040WP53960 MSK1YNL073W 1731 nt4.29□□□□□ -1.72
YNL040WP53960 FRT2YAL028W 1587 nt4.29□□□□□ -1.72
YNL040WP53960 BUD25YER014C-A 462 nt4.29□□□□□ -1.72
YNL040WP53960 GLE2YER107C 1098 nt4.29□□□□□ -1.72
YNL040WP53960 AAD6YFL056C 639 nt4.29□□□□□ -1.72
YNL040WP53960 YKR104WYKR104W 921 nt4.29□□□□□ -1.72
YNL040WP53960 MPH2YDL247W 1830 nt4.28□□□□□ -1.72
YNL040WP53960 KRS1YDR037W 1776 nt4.28□□□□□ -1.72
YNL040WP53960 MIS1YBR084W 2928 nt4.28□□□□□ -1.72
YNL040WP53960 AIM7YDR063W 450 nt4.28□□□□□ -1.72
YNL040WP53960 ARP10YDR106W 855 nt4.28□□□□□ -1.72
YNL040WP53960 MRP4YHL004W 1185 nt4.28□□□□□ -1.72
YNL040WP53960 YIL028WYIL028W 399 nt4.28□□□□□ -1.72
YNL040WP53960 RPL14AYKL006W 417 nt4.28□□□□□ -1.72
YNL040WP53960 YOR131CYOR131C 657 nt4.28□□□□□ -1.72
YNL040WP53960 SMA1YPL027W 738 nt4.28□□□□□ -1.72
YNL040WP53960 SRO7YPR032W 3102 nt4.28□□□□□ -1.72
YNL040WP53960 RAD1YPL022W 3303 nt4.28□□□□□ -1.72
YNL040WP53960 IFM1YOL023W 2031 nt4.28□□□□□ -1.73
YNL040WP53960 YHR177WYHR177W 1362 nt4.27□□□□□ -1.73
YNL040WP53960 KIN2YLR096W 3444 nt4.27□□□□□ -1.73
YNL040WP53960 SPC105YGL093W 2754 nt4.27□□□□□ -1.73
YNL040WP53960 RSC58YLR033W 1509 nt4.27□□□□□ -1.73
YNL040WP53960 RFT1YBL020W 1725 nt4.27□□□□□ -1.73
YNL040WP53960 YND1YER005W 1893 nt4.27□□□□□ -1.73
YNL040WP53960 UBC6YER100W 753 nt4.27□□□□□ -1.73
YNL040WP53960 YIR043CYIR043C 693 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms