Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.01■□□□□ 0.47
RAB5CP51148 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAB5CP51148 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAB5CP51148 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RAB5CP51148 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB5CP51148 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RAB5CP51148 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB5CP51148 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAB5CP51148 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB5CP51148 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RAB5CP51148 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
RAB5CP51148 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB5CP51148 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAB5CP51148 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RAB5CP51148 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB5CP51148 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB5CP51148 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
RAB5CP51148 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB5CP51148 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.99■□□□□ 0.47
RAB5CP51148 AC139530.1-201ENST00000575312 1977 ntBASIC17.99■□□□□ 0.47
RAB5CP51148 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB5CP51148 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB5CP51148 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
RAB5CP51148 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RAB5CP51148 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB5CP51148 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RAB5CP51148 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB5CP51148 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RAB5CP51148 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB5CP51148 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RAB5CP51148 AC073130.3-201ENST00000624389 2278 ntBASIC17.97■□□□□ 0.47
RAB5CP51148 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB5CP51148 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB5CP51148 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB5CP51148 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB5CP51148 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB5CP51148 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB5CP51148 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB5CP51148 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB5CP51148 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB5CP51148 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RAB5CP51148 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 MIR3665-201ENST00000578708 105 ntBASIC17.96■□□□□ 0.47
RAB5CP51148 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB5CP51148 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB5CP51148 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB5CP51148 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.96■□□□□ 0.46
RAB5CP51148 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
RAB5CP51148 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB5CP51148 AC026310.3-201ENST00000625186 2373 ntBASIC17.95■□□□□ 0.46
RAB5CP51148 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.95■□□□□ 0.46
RAB5CP51148 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RAB5CP51148 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RAB5CP51148 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RAB5CP51148 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB5CP51148 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RAB5CP51148 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.94■□□□□ 0.46
RAB5CP51148 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RAB5CP51148 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB5CP51148 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 AC126177.7-201ENST00000547904 679 ntBASIC17.93■□□□□ 0.46
RAB5CP51148 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.93■□□□□ 0.46
RAB5CP51148 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RAB5CP51148 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms