Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.1■□□□□ 0.97
CLK3P49761 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK3P49761 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK3P49761 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLK3P49761 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK3P49761 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLK3P49761 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CLK3P49761 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK3P49761 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
CLK3P49761 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK3P49761 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.09■□□□□ 0.97
CLK3P49761 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK3P49761 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK3P49761 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.09■□□□□ 0.97
CLK3P49761 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLK3P49761 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CLK3P49761 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CLK3P49761 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLK3P49761 AC004448.1-201ENST00000458332 883 ntBASIC21.08■□□□□ 0.97
CLK3P49761 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLK3P49761 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CLK3P49761 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLK3P49761 DUSP8P3-201ENST00000399571 1760 ntBASIC21.08■□□□□ 0.96
CLK3P49761 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK3P49761 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.07■□□□□ 0.96
CLK3P49761 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLK3P49761 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK3P49761 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK3P49761 AC092028.1-203ENST00000608262 953 ntBASIC21.07■□□□□ 0.96
CLK3P49761 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CLK3P49761 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLK3P49761 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
CLK3P49761 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLK3P49761 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLK3P49761 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CLK3P49761 AC131274.2-201ENST00000580697 1507 ntBASIC21.06■□□□□ 0.96
CLK3P49761 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.06■□□□□ 0.96
CLK3P49761 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.06■□□□□ 0.96
CLK3P49761 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLK3P49761 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLK3P49761 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLK3P49761 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLK3P49761 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.05■□□□□ 0.96
CLK3P49761 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK3P49761 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK3P49761 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK3P49761 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.05■□□□□ 0.96
CLK3P49761 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.05■□□□□ 0.96
CLK3P49761 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CLK3P49761 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.05■□□□□ 0.96
CLK3P49761 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.05■□□□□ 0.96
CLK3P49761 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
CLK3P49761 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLK3P49761 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLK3P49761 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLK3P49761 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK3P49761 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLK3P49761 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.04■□□□□ 0.96
CLK3P49761 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK3P49761 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CLK3P49761 LINC00526-201ENST00000581067 1875 ntBASIC21.04■□□□□ 0.96
CLK3P49761 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLK3P49761 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLK3P49761 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CLK3P49761 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK3P49761 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK3P49761 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CLK3P49761 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK3P49761 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.03■□□□□ 0.96
CLK3P49761 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.03■□□□□ 0.96
CLK3P49761 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.03■□□□□ 0.96
CLK3P49761 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.03■□□□□ 0.96
CLK3P49761 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK3P49761 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.03■□□□□ 0.96
CLK3P49761 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.03■□□□□ 0.96
CLK3P49761 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.03■□□□□ 0.96
CLK3P49761 AC092068.2-201ENST00000590491 1708 ntBASIC21.03■□□□□ 0.96
CLK3P49761 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLK3P49761 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.02■□□□□ 0.96
CLK3P49761 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK3P49761 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK3P49761 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLK3P49761 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK3P49761 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.02■□□□□ 0.96
CLK3P49761 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLK3P49761 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLK3P49761 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms