Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	GSP2	YOR185C	663 nt		5.03	□□□□□ -1.6
SKP2	P42843	SPS4	YOR313C	1017 nt		5.03	□□□□□ -1.6
SKP2	P42843	FAP1	YNL023C	2898 nt		5.03	□□□□□ -1.6
SKP2	P42843	FRE1	YLR214W	2061 nt		5.03	□□□□□ -1.6
SKP2	P42843	EXO70	YJL085W	1872 nt		5.03	□□□□□ -1.6
SKP2	P42843	BRE2	YLR015W	1518 nt		5.02	□□□□□ -1.61
SKP2	P42843	CNA1	YLR433C	1662 nt		5.02	□□□□□ -1.61
SKP2	P42843	SAS10	YDL153C	1833 nt		5.02	□□□□□ -1.61
SKP2	P42843	LYP1	YNL268W	1836 nt		5.02	□□□□□ -1.61
SKP2	P42843	RXT3	YDL076C	885 nt		5.02	□□□□□ -1.61
SKP2	P42843	MRM2	YGL136C	963 nt		5.02	□□□□□ -1.61
SKP2	P42843	OKP1	YGR179C	1221 nt		5.02	□□□□□ -1.61
SKP2	P42843	PCT1	YGR202C	1275 nt		5.02	□□□□□ -1.61
SKP2	P42843	YGR204C-A	YGR204C-A	114 nt		5.02	□□□□□ -1.61
SKP2	P42843	RFC2	YJR068W	1062 nt		5.02	□□□□□ -1.61
SKP2	P42843	UBI4	YLL039C	1146 nt		5.02	□□□□□ -1.61
SKP2	P42843	PSY3	YLR376C	729 nt		5.02	□□□□□ -1.61
SKP2	P42843	BAG7	YOR134W	1230 nt		5.02	□□□□□ -1.61
SKP2	P42843	TCM62	YBR044C	1719 nt		5.02	□□□□□ -1.61
SKP2	P42843	DNF2	YDR093W	4839 nt		5.02	□□□□□ -1.61
SKP2	P42843	BIT2	YBR270C	1638 nt		5.01	□□□□□ -1.61
SKP2	P42843	LDB17	YDL146W	1476 nt		5.01	□□□□□ -1.61
SKP2	P42843	PTC1	YDL006W	846 nt		5.01	□□□□□ -1.61
SKP2	P42843	COS7	YDL248W	1152 nt		5.01	□□□□□ -1.61
SKP2	P42843	TRS23	YDR246W	660 nt		5.01	□□□□□ -1.61
SKP2	P42843	YER138W-A	YER138W-A	105 nt		5.01	□□□□□ -1.61
SKP2	P42843	POP6	YGR030C	477 nt		5.01	□□□□□ -1.61
SKP2	P42843	WSS1	YHR134W	810 nt		5.01	□□□□□ -1.61
SKP2	P42843	COS5	YJR161C	1152 nt		5.01	□□□□□ -1.61
SKP2	P42843	SPG4	YMR107W	348 nt		5.01	□□□□□ -1.61
SKP2	P42843	YBL107W-A	YBL107W-A	105 nt		5.01	□□□□□ -1.61
SKP2	P42843	AME1	YBR211C	975 nt		5.01	□□□□□ -1.61
SKP2	P42843	ALG2	YGL065C	1512 nt		5.01	□□□□□ -1.61
SKP2	P42843	YDL109C	YDL109C	1944 nt		5.01	□□□□□ -1.61
SKP2	P42843	BDP1	YNL039W	1785 nt		5.01	□□□□□ -1.61
SKP2	P42843	RAD30	YDR419W	1899 nt		5	□□□□□ -1.61
SKP2	P42843	CUE2	YKL090W	1332 nt		5	□□□□□ -1.61
SKP2	P42843	APC4	YDR118W	1959 nt		5	□□□□□ -1.61
SKP2	P42843	RIM15	YFL033C	5313 nt		5	□□□□□ -1.61
SKP2	P42843	TOS3	YGL179C	1683 nt		5	□□□□□ -1.61
SKP2	P42843	YDL012C	YDL012C	324 nt		5	□□□□□ -1.61
SKP2	P42843	UBC8	YEL012W	657 nt		5	□□□□□ -1.61
SKP2	P42843	YER133W-A	YER133W-A	342 nt		5	□□□□□ -1.61
SKP2	P42843	YGL199C	YGL199C	471 nt		5	□□□□□ -1.61
SKP2	P42843	SFK1	YKL051W	1062 nt		5	□□□□□ -1.61
SKP2	P42843	YMR178W	YMR178W	825 nt		5	□□□□□ -1.61
SKP2	P42843	ARG4	YHR018C	1392 nt		5	□□□□□ -1.61
SKP2	P42843	CAF4	YKR036C	1932 nt		4.99	□□□□□ -1.61
SKP2	P42843	FOX2	YKR009C	2703 nt		4.99	□□□□□ -1.61
SKP2	P42843	SIR1	YKR101W	1965 nt		4.99	□□□□□ -1.61
SKP2	P42843	GCV1	YDR019C	1203 nt		4.99	□□□□□ -1.61
SKP2	P42843	NUP42	YDR192C	1293 nt		4.99	□□□□□ -1.61
SKP2	P42843	KRE28	YDR532C	1158 nt		4.99	□□□□□ -1.61
SKP2	P42843	YIL089W	YIL089W	618 nt		4.99	□□□□□ -1.61
SKP2	P42843	SLZ1	YNL196C	897 nt		4.99	□□□□□ -1.61
SKP2	P42843	MPD1	YOR288C	957 nt		4.99	□□□□□ -1.61
SKP2	P42843	MET31	YPL038W	534 nt		4.99	□□□□□ -1.61
SKP2	P42843	GRE1	YPL223C	507 nt		4.99	□□□□□ -1.61
SKP2	P42843	SRB6	YBR253W	366 nt		4.99	□□□□□ -1.61
SKP2	P42843	PHO12	YHR215W	1404 nt		4.98	□□□□□ -1.61
SKP2	P42843	PHO11	YAR071W	1404 nt		4.98	□□□□□ -1.61
SKP2	P42843	RTC1	YOL138C	4026 nt		4.98	□□□□□ -1.61
SKP2	P42843	MEF2	YJL102W	2460 nt		4.98	□□□□□ -1.61
SKP2	P42843	PCL2	YDL127W	927 nt		4.98	□□□□□ -1.61
SKP2	P42843	TRM8	YDL201W	861 nt		4.98	□□□□□ -1.61
SKP2	P42843	RML2	YEL050C	1182 nt		4.98	□□□□□ -1.61
SKP2	P42843	TRX2	YGR209C	315 nt		4.98	□□□□□ -1.61
SKP2	P42843	YLL047W	YLL047W	384 nt		4.98	□□□□□ -1.61
SKP2	P42843	CTL1	YMR180C	963 nt		4.98	□□□□□ -1.61
SKP2	P42843	YOL038C-A	YOL038C-A	96 nt		4.98	□□□□□ -1.61
SKP2	P42843	TRE1	YPL176C	2352 nt		4.98	□□□□□ -1.61
SKP2	P42843	SYG1	YIL047C	2709 nt		4.97	□□□□□ -1.61
SKP2	P42843	SLM5	YCR024C	1479 nt		4.97	□□□□□ -1.61
SKP2	P42843	YFT2	YDR319C	825 nt		4.97	□□□□□ -1.61
SKP2	P42843	TRP4	YDR354W	1143 nt		4.97	□□□□□ -1.61
SKP2	P42843	YDR509W	YDR509W	348 nt		4.97	□□□□□ -1.61
SKP2	P42843	ACT1	YFL039C	1128 nt		4.97	□□□□□ -1.61
SKP2	P42843	YGR015C	YGR015C	987 nt		4.97	□□□□□ -1.61
SKP2	P42843	SNL1	YIL016W	480 nt		4.97	□□□□□ -1.61
SKP2	P42843	RPL43B	YJR094W-A	279 nt		4.97	□□□□□ -1.61
SKP2	P42843	YBL006W-A	YBL006W-A	150 nt		4.97	□□□□□ -1.61
SKP2	P42843	COS3	YML132W	1140 nt		4.97	□□□□□ -1.61
SKP2	P42843	HEK2	YBL032W	1146 nt		4.97	□□□□□ -1.61
SKP2	P42843	MRPS8	YMR158W	468 nt		4.97	□□□□□ -1.61
SKP2	P42843	YMR245W	YMR245W	621 nt		4.97	□□□□□ -1.61
SKP2	P42843	TLG2	YOL018C	1194 nt		4.97	□□□□□ -1.61
SKP2	P42843	YBR134W	YBR134W	402 nt		4.97	□□□□□ -1.61
SKP2	P42843	COS2	YBR302C	1140 nt		4.97	□□□□□ -1.61
SKP2	P42843	LYS2	YBR115C	4179 nt		4.97	□□□□□ -1.61
SKP2	P42843	KAR5	YMR065W	1515 nt		4.97	□□□□□ -1.61
SKP2	P42843	RKM2	YDR198C	1440 nt		4.97	□□□□□ -1.61
SKP2	P42843	SEO1	YAL067C	1782 nt		4.96	□□□□□ -1.61
SKP2	P42843	PUS9	YDL036C	1389 nt		4.96	□□□□□ -1.62
SKP2	P42843	MPH2	YDL247W	1830 nt		4.96	□□□□□ -1.62
SKP2	P42843	LNP1	YHR192W	837 nt		4.96	□□□□□ -1.62
SKP2	P42843	MTG1	YMR097C	1104 nt		4.96	□□□□□ -1.62
SKP2	P42843	YOL166C	YOL166C	339 nt		4.96	□□□□□ -1.62
SKP2	P42843	NAT3	YPR131C	588 nt		4.96	□□□□□ -1.62
SKP2	P42843	DBF4	YDR052C	2115 nt		4.96	□□□□□ -1.62
SKP2	P42843	STP4	YDL048C	1473 nt		4.95	□□□□□ -1.62

Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms