Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL4A5P29400 AL499627.2-201ENST00000606283 725 ntBASIC27.4■■□□□ 1.98
COL4A5P29400 AC073111.5-205ENST00000641717 521 ntBASIC27.4■■□□□ 1.98
COL4A5P29400 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL4A5P29400 DUSP8P4-201ENST00000399538 1761 ntBASIC27.4■■□□□ 1.98
COL4A5P29400 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
COL4A5P29400 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
COL4A5P29400 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.98
COL4A5P29400 AC091060.1-201ENST00000623524 1766 ntBASIC27.39■■□□□ 1.98
COL4A5P29400 AL121749.1-202ENST00000609313 2153 ntBASIC27.39■■□□□ 1.98
COL4A5P29400 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL4A5P29400 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
COL4A5P29400 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
COL4A5P29400 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
COL4A5P29400 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.39■■□□□ 1.97
COL4A5P29400 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.39■■□□□ 1.97
COL4A5P29400 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
COL4A5P29400 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
COL4A5P29400 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
COL4A5P29400 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
COL4A5P29400 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL4A5P29400 CDCA4P2-201ENST00000441182 718 ntBASIC27.38■■□□□ 1.97
COL4A5P29400 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.38■■□□□ 1.97
COL4A5P29400 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.38■■□□□ 1.97
COL4A5P29400 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.38■■□□□ 1.97
COL4A5P29400 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.38■■□□□ 1.97
COL4A5P29400 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.38■■□□□ 1.97
COL4A5P29400 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.38■■□□□ 1.97
COL4A5P29400 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL4A5P29400 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL4A5P29400 AP005435.1-201ENST00000529293 1178 ntBASIC27.37■■□□□ 1.97
COL4A5P29400 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.37■■□□□ 1.97
COL4A5P29400 AC080038.1-201ENST00000611274 1154 ntBASIC27.37■■□□□ 1.97
COL4A5P29400 AL161729.1-201ENST00000604104 1402 ntBASIC27.37■■□□□ 1.97
COL4A5P29400 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.37■■□□□ 1.97
COL4A5P29400 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL4A5P29400 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL4A5P29400 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL4A5P29400 ABHD17AP1-201ENST00000358206 933 ntBASIC27.36■■□□□ 1.97
COL4A5P29400 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.36■■□□□ 1.97
COL4A5P29400 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
COL4A5P29400 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.36■■□□□ 1.97
COL4A5P29400 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.36■■□□□ 1.97
COL4A5P29400 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.36■■□□□ 1.97
COL4A5P29400 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL4A5P29400 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL4A5P29400 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL4A5P29400 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
COL4A5P29400 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.35■■□□□ 1.97
COL4A5P29400 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL4A5P29400 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.35■■□□□ 1.97
COL4A5P29400 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL4A5P29400 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.34■■□□□ 1.97
COL4A5P29400 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.34■■□□□ 1.97
COL4A5P29400 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL4A5P29400 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL4A5P29400 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.34■■□□□ 1.97
COL4A5P29400 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL4A5P29400 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
COL4A5P29400 TPRG1LP1-201ENST00000598702 760 ntBASIC27.33■■□□□ 1.97
COL4A5P29400 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL4A5P29400 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.33■■□□□ 1.97
COL4A5P29400 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.33■■□□□ 1.97
COL4A5P29400 AC104771.1-201ENST00000603335 964 ntBASIC27.33■■□□□ 1.97
COL4A5P29400 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.32■■□□□ 1.96
COL4A5P29400 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.32■■□□□ 1.96
COL4A5P29400 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
COL4A5P29400 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
COL4A5P29400 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.32■■□□□ 1.96
COL4A5P29400 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.32■■□□□ 1.96
COL4A5P29400 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL4A5P29400 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL4A5P29400 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL4A5P29400 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.31■■□□□ 1.96
COL4A5P29400 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
COL4A5P29400 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL4A5P29400 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.31■■□□□ 1.96
COL4A5P29400 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.31■■□□□ 1.96
COL4A5P29400 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.31■■□□□ 1.96
COL4A5P29400 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.31■■□□□ 1.96
COL4A5P29400 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
COL4A5P29400 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL4A5P29400 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.31■■□□□ 1.96
COL4A5P29400 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.31■■□□□ 1.96
COL4A5P29400 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
COL4A5P29400 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
COL4A5P29400 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.3■■□□□ 1.96
COL4A5P29400 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.3■■□□□ 1.96
COL4A5P29400 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL4A5P29400 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms