Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC30.06■■■□□ 2.4
RXRBP28702 AC133637.1-201ENST00000624115 1537 ntBASIC30.06■■■□□ 2.4
RXRBP28702 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.06■■■□□ 2.4
RXRBP28702 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
RXRBP28702 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
RXRBP28702 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.05■■■□□ 2.4
RXRBP28702 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RXRBP28702 AC073210.2-201ENST00000430369 194 ntBASIC30.04■■■□□ 2.4
RXRBP28702 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.04■■■□□ 2.4
RXRBP28702 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
RXRBP28702 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RXRBP28702 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.03■■■□□ 2.4
RXRBP28702 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.03■■■□□ 2.4
RXRBP28702 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RXRBP28702 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RXRBP28702 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
RXRBP28702 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RXRBP28702 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.03■■■□□ 2.4
RXRBP28702 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RXRBP28702 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RXRBP28702 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
RXRBP28702 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RXRBP28702 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RXRBP28702 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
RXRBP28702 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RXRBP28702 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RXRBP28702 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC30.01■■■□□ 2.39
RXRBP28702 MFSD11-216ENST00000590393 1141 ntBASIC30.01■■■□□ 2.39
RXRBP28702 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC30.01■■■□□ 2.39
RXRBP28702 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RXRBP28702 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30■■■□□ 2.39
RXRBP28702 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RXRBP28702 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30■■■□□ 2.39
RXRBP28702 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30■■■□□ 2.39
RXRBP28702 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RXRBP28702 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RXRBP28702 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RXRBP28702 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.99■■■□□ 2.39
RXRBP28702 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.99■■■□□ 2.39
RXRBP28702 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RXRBP28702 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RXRBP28702 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
RXRBP28702 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RXRBP28702 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.99■■■□□ 2.39
RXRBP28702 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC29.99■■■□□ 2.39
RXRBP28702 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC29.99■■■□□ 2.39
RXRBP28702 CASP6-205ENST00000505486 538 ntTSL 4 BASIC29.99■■■□□ 2.39
RXRBP28702 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RXRBP28702 AC005181.1-201ENST00000604782 1256 ntBASIC29.99■■■□□ 2.39
RXRBP28702 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RXRBP28702 MIR1224-201ENST00000408193 85 ntBASIC29.98■■■□□ 2.39
RXRBP28702 AC098590.1-201ENST00000468126 897 ntBASIC29.98■■■□□ 2.39
RXRBP28702 TESC-206ENST00000541210 936 ntTSL 3 BASIC29.98■■■□□ 2.39
RXRBP28702 AC231657.2-201ENST00000624556 255 ntBASIC29.98■■■□□ 2.39
RXRBP28702 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RXRBP28702 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
RXRBP28702 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RXRBP28702 OR2I1P-207ENST00000453522 948 ntBASIC29.97■■■□□ 2.39
RXRBP28702 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RXRBP28702 AC097639.1-201ENST00000565519 1891 ntBASIC29.97■■■□□ 2.39
RXRBP28702 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RXRBP28702 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RXRBP28702 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.96■■■□□ 2.39
RXRBP28702 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RXRBP28702 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.96■■■□□ 2.39
RXRBP28702 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RXRBP28702 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
RXRBP28702 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC29.96■■■□□ 2.39
RXRBP28702 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.96■■■□□ 2.39
RXRBP28702 AL022069.1-201ENST00000568025 1636 ntBASIC29.96■■■□□ 2.39
RXRBP28702 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
RXRBP28702 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RXRBP28702 DUSP5P2-201ENST00000426873 1033 ntBASIC29.95■■■□□ 2.39
RXRBP28702 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC29.95■■■□□ 2.38
RXRBP28702 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
RXRBP28702 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC29.94■■■□□ 2.38
RXRBP28702 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC29.94■■■□□ 2.38
RXRBP28702 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
RXRBP28702 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.94■■■□□ 2.38
RXRBP28702 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
RXRBP28702 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
RXRBP28702 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RXRBP28702 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC29.93■■■□□ 2.38
RXRBP28702 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RXRBP28702 AC007322.1-201ENST00000426983 750 ntBASIC29.93■■■□□ 2.38
RXRBP28702 RPS2P4-201ENST00000476944 856 ntBASIC29.93■■■□□ 2.38
RXRBP28702 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC29.93■■■□□ 2.38
RXRBP28702 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
RXRBP28702 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC29.93■■■□□ 2.38
RXRBP28702 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms