Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDE4AP27815 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDE4AP27815 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE4AP27815 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE4AP27815 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC28.18■■■□□ 2.1
PDE4AP27815 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.18■■■□□ 2.1
PDE4AP27815 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.18■■■□□ 2.1
PDE4AP27815 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE4AP27815 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE4AP27815 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE4AP27815 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
PDE4AP27815 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE4AP27815 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE4AP27815 ALDH1A3-203ENST00000557963 1670 ntBASIC28.17■■■□□ 2.1
PDE4AP27815 KRT18P24-201ENST00000344739 1156 ntBASIC28.17■■■□□ 2.1
PDE4AP27815 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE4AP27815 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE4AP27815 AC103834.1-201ENST00000520383 144 ntBASIC28.17■■■□□ 2.1
PDE4AP27815 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE4AP27815 AL033527.3-201ENST00000566366 1196 ntBASIC28.17■■■□□ 2.1
PDE4AP27815 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDE4AP27815 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PDE4AP27815 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE4AP27815 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC28.16■■■□□ 2.1
PDE4AP27815 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE4AP27815 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PDE4AP27815 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.15■■■□□ 2.1
PDE4AP27815 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
PDE4AP27815 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 AC074183.2-201ENST00000623112 922 ntBASIC28.15■■■□□ 2.1
PDE4AP27815 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
PDE4AP27815 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PDE4AP27815 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
PDE4AP27815 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDE4AP27815 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC28.14■■■□□ 2.1
PDE4AP27815 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDE4AP27815 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PDE4AP27815 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE4AP27815 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.13■■■□□ 2.09
PDE4AP27815 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE4AP27815 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
PDE4AP27815 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
PDE4AP27815 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC28.13■■■□□ 2.09
PDE4AP27815 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.13■■■□□ 2.09
PDE4AP27815 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.13■■■□□ 2.09
PDE4AP27815 THA1P-201ENST00000590384 1145 ntBASIC28.13■■■□□ 2.09
PDE4AP27815 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.13■■■□□ 2.09
PDE4AP27815 AC012354.3-201ENST00000623734 483 ntBASIC28.13■■■□□ 2.09
PDE4AP27815 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE4AP27815 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE4AP27815 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE4AP27815 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.12■■■□□ 2.09
PDE4AP27815 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE4AP27815 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE4AP27815 AL137060.1-201ENST00000618151 2648 ntBASIC28.11■■■□□ 2.09
PDE4AP27815 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDE4AP27815 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE4AP27815 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.1■■■□□ 2.09
PDE4AP27815 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.1■■■□□ 2.09
PDE4AP27815 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE4AP27815 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE4AP27815 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE4AP27815 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE4AP27815 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PDE4AP27815 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE4AP27815 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
PDE4AP27815 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.09■■■□□ 2.09
PDE4AP27815 MIR4508-201ENST00000584178 70 ntBASIC28.09■■■□□ 2.09
PDE4AP27815 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.09■■■□□ 2.09
PDE4AP27815 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.09■■■□□ 2.09
PDE4AP27815 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE4AP27815 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.09■■■□□ 2.09
PDE4AP27815 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PDE4AP27815 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PDE4AP27815 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
PDE4AP27815 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PDE4AP27815 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PDE4AP27815 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms