Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF1P27539 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GDF1P27539 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF1P27539 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF1P27539 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.32■□□□□ 0.84
GDF1P27539 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
GDF1P27539 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.32■□□□□ 0.84
GDF1P27539 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.32■□□□□ 0.84
GDF1P27539 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.32■□□□□ 0.84
GDF1P27539 AL031432.3-201ENST00000607698 485 ntBASIC20.32■□□□□ 0.84
GDF1P27539 AC136469.2-201ENST00000623944 1028 ntBASIC20.32■□□□□ 0.84
GDF1P27539 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
GDF1P27539 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
GDF1P27539 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.32■□□□□ 0.84
GDF1P27539 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF1P27539 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 AC144652.1-201ENST00000609974 1624 ntBASIC20.31■□□□□ 0.84
GDF1P27539 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GDF1P27539 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
GDF1P27539 SUDS3P1-201ENST00000505831 966 ntBASIC20.31■□□□□ 0.84
GDF1P27539 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.31■□□□□ 0.84
GDF1P27539 AF213884.3-201ENST00000563833 479 ntBASIC20.31■□□□□ 0.84
GDF1P27539 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.31■□□□□ 0.84
GDF1P27539 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.31■□□□□ 0.84
GDF1P27539 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
GDF1P27539 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GDF1P27539 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
GDF1P27539 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GDF1P27539 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 AP001330.3-201ENST00000520123 633 ntBASIC20.3■□□□□ 0.84
GDF1P27539 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.3■□□□□ 0.84
GDF1P27539 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
GDF1P27539 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 FP325331.1-202ENST00000623531 1380 ntBASIC20.3■□□□□ 0.84
GDF1P27539 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GDF1P27539 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GDF1P27539 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDF1P27539 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.29■□□□□ 0.84
GDF1P27539 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GDF1P27539 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.29■□□□□ 0.84
GDF1P27539 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
GDF1P27539 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GDF1P27539 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.28■□□□□ 0.84
GDF1P27539 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 LINC01529-204ENST00000636474 1715 ntBASIC20.28■□□□□ 0.84
GDF1P27539 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.28■□□□□ 0.84
GDF1P27539 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GDF1P27539 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF1P27539 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF1P27539 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 MIR939-201ENST00000401314 82 ntBASIC20.27■□□□□ 0.84
GDF1P27539 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 AC008764.7-201ENST00000593779 1081 ntBASIC20.27■□□□□ 0.84
GDF1P27539 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
GDF1P27539 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GDF1P27539 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
GDF1P27539 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
GDF1P27539 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.26■□□□□ 0.83
GDF1P27539 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.26■□□□□ 0.83
GDF1P27539 AC027682.1-201ENST00000562846 899 ntBASIC20.26■□□□□ 0.83
GDF1P27539 DUX4L4-201ENST00000566884 1269 ntBASIC20.26■□□□□ 0.83
GDF1P27539 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF1P27539 AL136967.2-201ENST00000623968 743 ntBASIC20.26■□□□□ 0.83
GDF1P27539 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GDF1P27539 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.26■□□□□ 0.83
GDF1P27539 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
GDF1P27539 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.25■□□□□ 0.83
GDF1P27539 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF1P27539 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.25■□□□□ 0.83
GDF1P27539 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
GDF1P27539 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GDF1P27539 AC091305.1-201ENST00000479476 895 ntBASIC20.25■□□□□ 0.83
GDF1P27539 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms