Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP6V0CP27449 AC026310.3-201ENST00000625186 2373 ntBASIC17.91■□□□□ 0.46
ATP6V0CP27449 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP6V0CP27449 SMPD5-203ENST00000639008 1464 ntBASIC17.9■□□□□ 0.46
ATP6V0CP27449 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP6V0CP27449 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP6V0CP27449 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.9■□□□□ 0.46
ATP6V0CP27449 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP6V0CP27449 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP6V0CP27449 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP6V0CP27449 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP6V0CP27449 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ATP6V0CP27449 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATP6V0CP27449 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATP6V0CP27449 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATP6V0CP27449 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP6V0CP27449 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP6V0CP27449 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP6V0CP27449 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 KRT18P10-201ENST00000388836 1287 ntBASIC17.88■□□□□ 0.45
ATP6V0CP27449 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ATP6V0CP27449 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP6V0CP27449 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 AC073130.3-201ENST00000624389 2278 ntBASIC17.87■□□□□ 0.45
ATP6V0CP27449 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP6V0CP27449 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP6V0CP27449 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ATP6V0CP27449 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATP6V0CP27449 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.86■□□□□ 0.45
ATP6V0CP27449 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP6V0CP27449 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ATP6V0CP27449 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATP6V0CP27449 AC079630.1-202ENST00000618127 1840 ntBASIC17.86■□□□□ 0.45
ATP6V0CP27449 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP6V0CP27449 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATP6V0CP27449 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATP6V0CP27449 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ATP6V0CP27449 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.85■□□□□ 0.45
ATP6V0CP27449 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP6V0CP27449 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms