Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC27.93■■■□□ 2.06
COL11A2P13942 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL11A2P13942 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.93■■■□□ 2.06
COL11A2P13942 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
COL11A2P13942 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
COL11A2P13942 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL11A2P13942 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.92■■■□□ 2.06
COL11A2P13942 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.92■■■□□ 2.06
COL11A2P13942 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.92■■■□□ 2.06
COL11A2P13942 AC073111.5-205ENST00000641717 521 ntBASIC27.92■■■□□ 2.06
COL11A2P13942 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.92■■■□□ 2.06
COL11A2P13942 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL11A2P13942 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL11A2P13942 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.91■■■□□ 2.06
COL11A2P13942 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
COL11A2P13942 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.91■■■□□ 2.06
COL11A2P13942 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.91■■■□□ 2.06
COL11A2P13942 TPRG1LP1-201ENST00000598702 760 ntBASIC27.91■■■□□ 2.06
COL11A2P13942 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.91■■■□□ 2.06
COL11A2P13942 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
COL11A2P13942 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.91■■■□□ 2.06
COL11A2P13942 AC006015.1-201ENST00000429970 570 ntBASIC27.9■■■□□ 2.06
COL11A2P13942 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL11A2P13942 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL11A2P13942 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL11A2P13942 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.89■■■□□ 2.06
COL11A2P13942 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL11A2P13942 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL11A2P13942 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.89■■■□□ 2.06
COL11A2P13942 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
COL11A2P13942 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
COL11A2P13942 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.05
COL11A2P13942 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.89■■■□□ 2.05
COL11A2P13942 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.89■■■□□ 2.05
COL11A2P13942 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
COL11A2P13942 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.89■■■□□ 2.05
COL11A2P13942 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
COL11A2P13942 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.88■■■□□ 2.05
COL11A2P13942 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
COL11A2P13942 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL11A2P13942 AC091060.1-201ENST00000623524 1766 ntBASIC27.88■■■□□ 2.05
COL11A2P13942 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL11A2P13942 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL11A2P13942 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
COL11A2P13942 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
COL11A2P13942 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.87■■■□□ 2.05
COL11A2P13942 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.87■■■□□ 2.05
COL11A2P13942 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.87■■■□□ 2.05
COL11A2P13942 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL11A2P13942 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.87■■■□□ 2.05
COL11A2P13942 AP005435.1-201ENST00000529293 1178 ntBASIC27.87■■■□□ 2.05
COL11A2P13942 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL11A2P13942 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
COL11A2P13942 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.86■■■□□ 2.05
COL11A2P13942 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
COL11A2P13942 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.86■■■□□ 2.05
COL11A2P13942 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.86■■■□□ 2.05
COL11A2P13942 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.86■■■□□ 2.05
COL11A2P13942 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL11A2P13942 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
COL11A2P13942 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL11A2P13942 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL11A2P13942 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.85■■■□□ 2.05
COL11A2P13942 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL11A2P13942 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL11A2P13942 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL11A2P13942 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.85■■■□□ 2.05
COL11A2P13942 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.85■■■□□ 2.05
COL11A2P13942 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.85■■■□□ 2.05
COL11A2P13942 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
COL11A2P13942 ABHD17AP1-201ENST00000358206 933 ntBASIC27.84■■■□□ 2.05
COL11A2P13942 AC016769.1-201ENST00000409132 1010 ntBASIC27.84■■■□□ 2.05
COL11A2P13942 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
COL11A2P13942 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.84■■■□□ 2.05
COL11A2P13942 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL11A2P13942 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.84■■■□□ 2.05
COL11A2P13942 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.83■■■□□ 2.05
COL11A2P13942 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.83■■■□□ 2.05
COL11A2P13942 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.83■■■□□ 2.05
COL11A2P13942 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.83■■■□□ 2.05
COL11A2P13942 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL11A2P13942 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.83■■■□□ 2.05
COL11A2P13942 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
COL11A2P13942 AC104771.1-201ENST00000603335 964 ntBASIC27.82■■■□□ 2.04
COL11A2P13942 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.82■■■□□ 2.04
COL11A2P13942 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL11A2P13942 LINC02228-203ENST00000641970 1355 ntBASIC27.82■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms