Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HLA-DOBP13765 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOBP13765 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.08■□□□□ 0.81
HLA-DOBP13765 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOBP13765 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DOBP13765 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HLA-DOBP13765 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DOBP13765 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DOBP13765 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HLA-DOBP13765 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.08■□□□□ 0.8
HLA-DOBP13765 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOBP13765 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOBP13765 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOBP13765 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOBP13765 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DOBP13765 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DOBP13765 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DOBP13765 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DOBP13765 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DOBP13765 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DOBP13765 KRT16P3-201ENST00000439127 1283 ntBASIC20.06■□□□□ 0.8
HLA-DOBP13765 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DOBP13765 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DOBP13765 AL353803.4-201ENST00000565882 1934 ntBASIC20.06■□□□□ 0.8
HLA-DOBP13765 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DOBP13765 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DOBP13765 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DOBP13765 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
HLA-DOBP13765 MIR6724-1-201ENST00000616420 92 ntBASIC20.04■□□□□ 0.8
HLA-DOBP13765 MIR6724-2-201ENST00000616483 92 ntBASIC20.04■□□□□ 0.8
HLA-DOBP13765 MIR6724-4-201ENST00000617390 92 ntBASIC20.04■□□□□ 0.8
HLA-DOBP13765 MIR6724-3-201ENST00000622482 92 ntBASIC20.04■□□□□ 0.8
HLA-DOBP13765 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DOBP13765 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DOBP13765 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DOBP13765 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DOBP13765 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DOBP13765 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DOBP13765 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DOBP13765 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DOBP13765 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DOBP13765 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-DOBP13765 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DOBP13765 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DOBP13765 AC009102.2-201ENST00000606772 1639 ntBASIC20.02■□□□□ 0.8
HLA-DOBP13765 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-DOBP13765 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DOBP13765 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DOBP13765 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DOBP13765 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HLA-DOBP13765 AC144652.1-201ENST00000609974 1624 ntBASIC20.02■□□□□ 0.79
HLA-DOBP13765 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DOBP13765 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DOBP13765 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-DOBP13765 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.01■□□□□ 0.79
HLA-DOBP13765 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DOBP13765 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HLA-DOBP13765 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOBP13765 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DOBP13765 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20■□□□□ 0.79
HLA-DOBP13765 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DOBP13765 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms