Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
UBL4AP11441 GUSBP5-201ENST00000418136 578 ntBASIC20.65■□□□□ 0.9
UBL4AP11441 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.65■□□□□ 0.9
UBL4AP11441 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBL4AP11441 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBL4AP11441 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBL4AP11441 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBL4AP11441 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBL4AP11441 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBL4AP11441 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBL4AP11441 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBL4AP11441 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBL4AP11441 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBL4AP11441 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBL4AP11441 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
UBL4AP11441 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.64■□□□□ 0.89
UBL4AP11441 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.64■□□□□ 0.89
UBL4AP11441 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBL4AP11441 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBL4AP11441 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBL4AP11441 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBL4AP11441 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL4AP11441 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL4AP11441 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL4AP11441 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBL4AP11441 KRT16P3-201ENST00000439127 1283 ntBASIC20.63■□□□□ 0.89
UBL4AP11441 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBL4AP11441 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL4AP11441 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBL4AP11441 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL4AP11441 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBL4AP11441 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
UBL4AP11441 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
UBL4AP11441 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UBL4AP11441 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.62■□□□□ 0.89
UBL4AP11441 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL4AP11441 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
UBL4AP11441 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.62■□□□□ 0.89
UBL4AP11441 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBL4AP11441 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.61■□□□□ 0.89
UBL4AP11441 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBL4AP11441 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.61■□□□□ 0.89
UBL4AP11441 MIR6724-1-201ENST00000616420 92 ntBASIC20.61■□□□□ 0.89
UBL4AP11441 MIR6724-2-201ENST00000616483 92 ntBASIC20.61■□□□□ 0.89
UBL4AP11441 MIR6724-4-201ENST00000617390 92 ntBASIC20.61■□□□□ 0.89
UBL4AP11441 MIR6724-3-201ENST00000622482 92 ntBASIC20.61■□□□□ 0.89
UBL4AP11441 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBL4AP11441 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.6■□□□□ 0.89
UBL4AP11441 AC079630.1-202ENST00000618127 1840 ntBASIC20.6■□□□□ 0.89
UBL4AP11441 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.6■□□□□ 0.89
UBL4AP11441 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.6■□□□□ 0.89
UBL4AP11441 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
UBL4AP11441 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBL4AP11441 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.59■□□□□ 0.89
UBL4AP11441 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.59■□□□□ 0.89
UBL4AP11441 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.59■□□□□ 0.89
UBL4AP11441 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
UBL4AP11441 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
UBL4AP11441 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBL4AP11441 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
UBL4AP11441 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.58■□□□□ 0.89
UBL4AP11441 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
UBL4AP11441 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.58■□□□□ 0.89
UBL4AP11441 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBL4AP11441 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.58■□□□□ 0.88
UBL4AP11441 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL4AP11441 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UBL4AP11441 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBL4AP11441 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.58■□□□□ 0.88
UBL4AP11441 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.57■□□□□ 0.88
UBL4AP11441 DUSP8P3-201ENST00000399571 1760 ntBASIC20.57■□□□□ 0.88
UBL4AP11441 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
UBL4AP11441 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBL4AP11441 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms