Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HOXC6P09630 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HOXC6P09630 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
HOXC6P09630 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.57■■□□□ 1.68
HOXC6P09630 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.57■■□□□ 1.68
HOXC6P09630 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.57■■□□□ 1.68
HOXC6P09630 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.57■■□□□ 1.68
HOXC6P09630 TERF1P2-201ENST00000583350 1212 ntBASIC25.57■■□□□ 1.68
HOXC6P09630 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.57■■□□□ 1.68
HOXC6P09630 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HOXC6P09630 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.57■■□□□ 1.68
HOXC6P09630 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
HOXC6P09630 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
HOXC6P09630 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.56■■□□□ 1.68
HOXC6P09630 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.56■■□□□ 1.68
HOXC6P09630 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.56■■□□□ 1.68
HOXC6P09630 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.56■■□□□ 1.68
HOXC6P09630 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.56■■□□□ 1.68
HOXC6P09630 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HOXC6P09630 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
HOXC6P09630 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.55■■□□□ 1.68
HOXC6P09630 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
HOXC6P09630 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
HOXC6P09630 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HOXC6P09630 AC004911.1-201ENST00000416316 871 ntBASIC25.55■■□□□ 1.68
HOXC6P09630 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
HOXC6P09630 OR2I1P-207ENST00000453522 948 ntBASIC25.55■■□□□ 1.68
HOXC6P09630 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HOXC6P09630 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.55■■□□□ 1.68
HOXC6P09630 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
HOXC6P09630 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HOXC6P09630 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HOXC6P09630 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.54■■□□□ 1.68
HOXC6P09630 NTF6G-201ENST00000591094 616 ntBASIC25.54■■□□□ 1.68
HOXC6P09630 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
HOXC6P09630 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HOXC6P09630 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
HOXC6P09630 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HOXC6P09630 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.54■■□□□ 1.68
HOXC6P09630 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
HOXC6P09630 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HOXC6P09630 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.53■■□□□ 1.68
HOXC6P09630 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HOXC6P09630 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HOXC6P09630 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.53■■□□□ 1.68
HOXC6P09630 KRT18P14-201ENST00000534205 1250 ntBASIC25.53■■□□□ 1.68
HOXC6P09630 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.53■■□□□ 1.68
HOXC6P09630 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HOXC6P09630 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.53■■□□□ 1.68
HOXC6P09630 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.53■■□□□ 1.68
HOXC6P09630 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HOXC6P09630 LINC02228-203ENST00000641970 1355 ntBASIC25.53■■□□□ 1.68
HOXC6P09630 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HOXC6P09630 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.52■■□□□ 1.68
HOXC6P09630 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.52■■□□□ 1.68
HOXC6P09630 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
HOXC6P09630 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HOXC6P09630 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.51■■□□□ 1.67
HOXC6P09630 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 ID1-201ENST00000376105 1233 ntBASIC25.51■■□□□ 1.67
HOXC6P09630 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.51■■□□□ 1.67
HOXC6P09630 AC010525.1-201ENST00000585559 441 ntBASIC25.51■■□□□ 1.67
HOXC6P09630 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.51■■□□□ 1.67
HOXC6P09630 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.51■■□□□ 1.67
HOXC6P09630 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HOXC6P09630 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
HOXC6P09630 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HOXC6P09630 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
HOXC6P09630 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.5■■□□□ 1.67
HOXC6P09630 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.5■■□□□ 1.67
HOXC6P09630 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.5■■□□□ 1.67
HOXC6P09630 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.49■■□□□ 1.67
HOXC6P09630 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
HOXC6P09630 FP325331.1-202ENST00000623531 1380 ntBASIC25.49■■□□□ 1.67
HOXC6P09630 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.49■■□□□ 1.67
HOXC6P09630 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.49■■□□□ 1.67
HOXC6P09630 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.49■■□□□ 1.67
HOXC6P09630 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HOXC6P09630 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.49■■□□□ 1.67
HOXC6P09630 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms