Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDGFRBP09619 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
PDGFRBP09619 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PDGFRBP09619 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PDGFRBP09619 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.88■■□□□ 1.41
PDGFRBP09619 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDGFRBP09619 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.87■■□□□ 1.41
PDGFRBP09619 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PDGFRBP09619 AC135279.3-201ENST00000610945 1311 ntBASIC23.87■■□□□ 1.41
PDGFRBP09619 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 AC079630.1-202ENST00000618127 1840 ntBASIC23.87■■□□□ 1.41
PDGFRBP09619 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.87■■□□□ 1.41
PDGFRBP09619 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.87■■□□□ 1.41
PDGFRBP09619 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PDGFRBP09619 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.87■■□□□ 1.41
PDGFRBP09619 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.87■■□□□ 1.41
PDGFRBP09619 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 AC144652.1-201ENST00000609974 1624 ntBASIC23.87■■□□□ 1.41
PDGFRBP09619 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFRBP09619 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.86■■□□□ 1.41
PDGFRBP09619 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFRBP09619 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFRBP09619 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFRBP09619 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFRBP09619 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PDGFRBP09619 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFRBP09619 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.85■■□□□ 1.41
PDGFRBP09619 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDGFRBP09619 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.85■■□□□ 1.41
PDGFRBP09619 MIR3181-201ENST00000578512 73 ntBASIC23.85■■□□□ 1.41
PDGFRBP09619 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.85■■□□□ 1.41
PDGFRBP09619 pRNA.6-201ENST00000610482 90 ntBASIC23.85■■□□□ 1.41
PDGFRBP09619 pRNA.5-201ENST00000612139 90 ntBASIC23.85■■□□□ 1.41
PDGFRBP09619 pRNA.11-201ENST00000618423 90 ntBASIC23.85■■□□□ 1.41
PDGFRBP09619 pRNA.13-201ENST00000619112 90 ntBASIC23.85■■□□□ 1.41
PDGFRBP09619 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.85■■□□□ 1.41
PDGFRBP09619 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDGFRBP09619 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDGFRBP09619 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PDGFRBP09619 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDGFRBP09619 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.85■■□□□ 1.41
PDGFRBP09619 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFRBP09619 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.84■■□□□ 1.41
PDGFRBP09619 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
PDGFRBP09619 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.84■■□□□ 1.41
PDGFRBP09619 AC005837.3-201ENST00000612163 286 ntBASIC23.84■■□□□ 1.41
PDGFRBP09619 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.83■■□□□ 1.41
PDGFRBP09619 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFRBP09619 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFRBP09619 FP325331.1-202ENST00000623531 1380 ntBASIC23.83■■□□□ 1.41
PDGFRBP09619 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.83■■□□□ 1.41
PDGFRBP09619 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.83■■□□□ 1.41
PDGFRBP09619 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFRBP09619 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFRBP09619 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.83■■□□□ 1.4
PDGFRBP09619 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.83■■□□□ 1.4
PDGFRBP09619 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFRBP09619 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFRBP09619 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFRBP09619 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PDGFRBP09619 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFRBP09619 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFRBP09619 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.82■■□□□ 1.4
PDGFRBP09619 LINC01529-204ENST00000636474 1715 ntBASIC23.82■■□□□ 1.4
PDGFRBP09619 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFRBP09619 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFRBP09619 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
PDGFRBP09619 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFRBP09619 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.82■■□□□ 1.4
PDGFRBP09619 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFRBP09619 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFRBP09619 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFRBP09619 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.81■■□□□ 1.4
PDGFRBP09619 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFRBP09619 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.81■■□□□ 1.4
PDGFRBP09619 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFRBP09619 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFRBP09619 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFRBP09619 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.8■■□□□ 1.4
PDGFRBP09619 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFRBP09619 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PDGFRBP09619 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFRBP09619 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFRBP09619 AC133561.4-201ENST00000566112 224 ntBASIC23.8■■□□□ 1.4
PDGFRBP09619 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.8■■□□□ 1.4
PDGFRBP09619 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
PDGFRBP09619 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.8■■□□□ 1.4
PDGFRBP09619 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFRBP09619 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFRBP09619 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PDGFRBP09619 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.79■■□□□ 1.4
PDGFRBP09619 DUX4L4-201ENST00000566884 1269 ntBASIC23.79■■□□□ 1.4
PDGFRBP09619 MIR4767-201ENST00000582827 78 ntBASIC23.79■■□□□ 1.4
PDGFRBP09619 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.79■■□□□ 1.4
PDGFRBP09619 AL138724.1-201ENST00000606771 1088 ntBASIC23.79■■□□□ 1.4
PDGFRBP09619 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms