Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.74■□□□□ 0.75
ERCC1P07992 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC1P07992 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.74■□□□□ 0.75
ERCC1P07992 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC1P07992 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
ERCC1P07992 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC1P07992 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC1P07992 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC1P07992 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ERCC1P07992 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC1P07992 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.73■□□□□ 0.75
ERCC1P07992 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC1P07992 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.73■□□□□ 0.75
ERCC1P07992 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ERCC1P07992 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC1P07992 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC1P07992 AC092068.2-201ENST00000590491 1708 ntBASIC19.73■□□□□ 0.75
ERCC1P07992 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC1P07992 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ERCC1P07992 AL022069.1-201ENST00000568025 1636 ntBASIC19.73■□□□□ 0.75
ERCC1P07992 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ERCC1P07992 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC1P07992 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
ERCC1P07992 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ERCC1P07992 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ERCC1P07992 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC1P07992 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ERCC1P07992 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC1P07992 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.71■□□□□ 0.75
ERCC1P07992 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC1P07992 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC1P07992 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC1P07992 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC1P07992 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 C9orf163-202ENST00000624034 2573 ntBASIC19.7■□□□□ 0.74
ERCC1P07992 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC1P07992 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC1P07992 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC1P07992 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC1P07992 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC1P07992 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.7■□□□□ 0.74
ERCC1P07992 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC1P07992 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC1P07992 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC1P07992 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ERCC1P07992 CLDN5-201ENST00000403084 2357 ntBASIC19.69■□□□□ 0.74
ERCC1P07992 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC1P07992 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC1P07992 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC1P07992 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.69■□□□□ 0.74
ERCC1P07992 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC1P07992 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC1P07992 MIR6722-201ENST00000617286 78 ntBASIC19.69■□□□□ 0.74
ERCC1P07992 AL117332.1-201ENST00000622628 974 ntBASIC19.69■□□□□ 0.74
ERCC1P07992 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC1P07992 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ERCC1P07992 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC1P07992 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC1P07992 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC1P07992 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC1P07992 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ERCC1P07992 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.68■□□□□ 0.74
ERCC1P07992 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ERCC1P07992 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC1P07992 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC1P07992 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms