Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ERBB2P04626 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ERBB2P04626 AL353803.4-201ENST00000565882 1934 ntBASIC23.62■■□□□ 1.37
ERBB2P04626 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ERBB2P04626 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.62■■□□□ 1.37
ERBB2P04626 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ERBB2P04626 C17orf82-201ENST00000623772 1530 ntBASIC23.61■■□□□ 1.37
ERBB2P04626 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.61■■□□□ 1.37
ERBB2P04626 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ERBB2P04626 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ERBB2P04626 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ERBB2P04626 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.6■■□□□ 1.37
ERBB2P04626 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.6■■□□□ 1.37
ERBB2P04626 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.6■■□□□ 1.37
ERBB2P04626 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.6■■□□□ 1.37
ERBB2P04626 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.6■■□□□ 1.37
ERBB2P04626 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ERBB2P04626 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ERBB2P04626 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ERBB2P04626 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
ERBB2P04626 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.59■■□□□ 1.37
ERBB2P04626 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.59■■□□□ 1.37
ERBB2P04626 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.59■■□□□ 1.37
ERBB2P04626 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ERBB2P04626 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ERBB2P04626 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ERBB2P04626 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.59■■□□□ 1.37
ERBB2P04626 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
ERBB2P04626 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.59■■□□□ 1.37
ERBB2P04626 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
ERBB2P04626 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.58■■□□□ 1.37
ERBB2P04626 AL512631.2-201ENST00000604634 923 ntBASIC23.58■■□□□ 1.37
ERBB2P04626 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
ERBB2P04626 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.57■■□□□ 1.36
ERBB2P04626 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.57■■□□□ 1.36
ERBB2P04626 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.57■■□□□ 1.36
ERBB2P04626 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.57■■□□□ 1.36
ERBB2P04626 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.57■■□□□ 1.36
ERBB2P04626 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.57■■□□□ 1.36
ERBB2P04626 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.57■■□□□ 1.36
ERBB2P04626 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.57■■□□□ 1.36
ERBB2P04626 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
ERBB2P04626 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
ERBB2P04626 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.56■■□□□ 1.36
ERBB2P04626 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ERBB2P04626 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ERBB2P04626 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.56■■□□□ 1.36
ERBB2P04626 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.56■■□□□ 1.36
ERBB2P04626 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.56■■□□□ 1.36
ERBB2P04626 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.56■■□□□ 1.36
ERBB2P04626 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.56■■□□□ 1.36
ERBB2P04626 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.56■■□□□ 1.36
ERBB2P04626 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ERBB2P04626 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ERBB2P04626 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
ERBB2P04626 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ERBB2P04626 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.54■■□□□ 1.36
ERBB2P04626 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.54■■□□□ 1.36
ERBB2P04626 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.54■■□□□ 1.36
ERBB2P04626 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.54■■□□□ 1.36
ERBB2P04626 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ERBB2P04626 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ERBB2P04626 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.53■■□□□ 1.36
ERBB2P04626 FP325331.1-202ENST00000623531 1380 ntBASIC23.53■■□□□ 1.36
ERBB2P04626 LINC01529-204ENST00000636474 1715 ntBASIC23.53■■□□□ 1.36
ERBB2P04626 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ERBB2P04626 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.53■■□□□ 1.36
ERBB2P04626 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ERBB2P04626 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.53■■□□□ 1.36
ERBB2P04626 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.52■■□□□ 1.36
ERBB2P04626 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ERBB2P04626 AC068473.5-201ENST00000616428 2072 ntBASIC23.52■■□□□ 1.36
ERBB2P04626 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.52■■□□□ 1.36
ERBB2P04626 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
ERBB2P04626 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.52■■□□□ 1.36
ERBB2P04626 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
ERBB2P04626 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
ERBB2P04626 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
ERBB2P04626 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.52■■□□□ 1.36
ERBB2P04626 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ERBB2P04626 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms