Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
OPN1SWP03999 AC074183.2-201ENST00000623112 922 ntBASIC20.88■□□□□ 0.93
OPN1SWP03999 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
OPN1SWP03999 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.88■□□□□ 0.93
OPN1SWP03999 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.88■□□□□ 0.93
OPN1SWP03999 LINC00526-201ENST00000581067 1875 ntBASIC20.88■□□□□ 0.93
OPN1SWP03999 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
OPN1SWP03999 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.87■□□□□ 0.93
OPN1SWP03999 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.87■□□□□ 0.93
OPN1SWP03999 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
OPN1SWP03999 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.87■□□□□ 0.93
OPN1SWP03999 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.87■□□□□ 0.93
OPN1SWP03999 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 AC004448.1-201ENST00000458332 883 ntBASIC20.87■□□□□ 0.93
OPN1SWP03999 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.87■□□□□ 0.93
OPN1SWP03999 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
OPN1SWP03999 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
OPN1SWP03999 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.86■□□□□ 0.93
OPN1SWP03999 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
OPN1SWP03999 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
OPN1SWP03999 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
OPN1SWP03999 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
OPN1SWP03999 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.85■□□□□ 0.93
OPN1SWP03999 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.85■□□□□ 0.93
OPN1SWP03999 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.85■□□□□ 0.93
OPN1SWP03999 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
OPN1SWP03999 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
OPN1SWP03999 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.85■□□□□ 0.93
OPN1SWP03999 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
OPN1SWP03999 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
OPN1SWP03999 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
OPN1SWP03999 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
OPN1SWP03999 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.84■□□□□ 0.93
OPN1SWP03999 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.84■□□□□ 0.93
OPN1SWP03999 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.84■□□□□ 0.93
OPN1SWP03999 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.84■□□□□ 0.93
OPN1SWP03999 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.84■□□□□ 0.93
OPN1SWP03999 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
OPN1SWP03999 AL353803.4-201ENST00000565882 1934 ntBASIC20.84■□□□□ 0.93
OPN1SWP03999 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
OPN1SWP03999 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
OPN1SWP03999 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.83■□□□□ 0.93
OPN1SWP03999 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
OPN1SWP03999 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.83■□□□□ 0.93
OPN1SWP03999 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.83■□□□□ 0.93
OPN1SWP03999 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
OPN1SWP03999 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
OPN1SWP03999 ECEL1P1-201ENST00000373592 1742 ntBASIC20.83■□□□□ 0.92
OPN1SWP03999 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
OPN1SWP03999 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
OPN1SWP03999 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
OPN1SWP03999 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.83■□□□□ 0.92
OPN1SWP03999 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
OPN1SWP03999 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
OPN1SWP03999 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
OPN1SWP03999 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
OPN1SWP03999 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OPN1SWP03999 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OPN1SWP03999 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
OPN1SWP03999 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.82■□□□□ 0.92
OPN1SWP03999 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.82■□□□□ 0.92
OPN1SWP03999 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.82■□□□□ 0.92
OPN1SWP03999 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
OPN1SWP03999 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OPN1SWP03999 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.82■□□□□ 0.92
OPN1SWP03999 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OPN1SWP03999 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OPN1SWP03999 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OPN1SWP03999 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.81■□□□□ 0.92
OPN1SWP03999 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OPN1SWP03999 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OPN1SWP03999 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
OPN1SWP03999 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.81■□□□□ 0.92
OPN1SWP03999 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms